Serratia sp. FGI94: D781_2407
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Entry
D781_2407 CDS
T02433
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smaf
Serratia sp. FGI94
Brite
KEGG Orthology (KO) [BR:
smaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smaf03032
]
D781_2407
03400 DNA repair and recombination proteins [BR:
smaf03400
]
D781_2407
Enzymes [BR:
smaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D781_2407
DNA replication proteins [BR:
smaf03032
]
Prokaryotic type
DNA Topoisomerases
D781_2407
DNA repair and recombination proteins [BR:
smaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D781_2407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGB82673
UniProt:
L0MFK8
LinkDB
All DBs
Position
complement(2551329..2553932)
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AA seq
867 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSSEDKTKAKKK
VKKDATTALVNRMGVDPYHGWKAQYEILPGKEKVVAELKSLAENADHIYLATDLDREGEA
IAWHLREVIGGDDQRFSRVVFNEITKNAIQQAFSEPGELNIDRVNAQQARRFMDRVVGYM
VSPLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEYWELRADLLAQGETALQMEV
THAHGKPFKPVNREQTHAAVALLEKARYTVQDREDKPTSSKPGAPFITSTLQQAASTRLG
FGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYIGDSFGEKYLPKAPNQYSSK
ENSQEAHEAIRPSDVNVVAEQLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVKAG
DYQLRAKGRTLRFDGWTKVMPALRKGDEDRTLPFVEIGSDLDLQQLLPSQHFTKPPARYS
EASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELM
NYDFTARMEDGLDQVANNHAEWKAVLDEFFAEFSEQLETAEKDPEEGGMRPNQMVLTSIA
CPTCGRQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPEAEVLNVLEGDDAETNALRA
RRRCQKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEEGEFRLKGYDGPVVECEKCGSEM
HLKMGRFGKYMGCTNENCKNTRKILRSGEVAPPKEDPVPLPELPCAKSDAYFVLRDGAAG
VFLAANTFPKSRETRAPLVEELQRFKDRLPEKLRYLADAPVADPEGNKTLVRFSRKTKQQ
YVSSEKEGKATGWTAFFVDGKWVETKK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtaatagttgagtccccggcaaaagccaaaactattaataaatat
ttgggtaatgactacgtggtgaagtccagcgtcggtcatatccgtgatttgccgaccagt
ggctcagccagcaaaaagagcgcggactcaagcgaagataaaaccaaagccaagaaaaaa
gttaaaaaagatgcaacgacggcgctggtcaaccgtatgggcgtcgacccttaccacggc
tggaaagcgcagtatgaaatactgccaggtaaagaaaaagttgtcgcagagttaaaatcg
ttagcggaaaacgccgaccatatttatctcgcaaccgacttggaccgcgaaggggaagcc
attgcctggcacctgcgggaagtgatcggcggcgacgaccagcgttttagccgcgtggtg
tttaacgaaatcaccaaaaacgccatccagcaggcgttcagcgagccgggcgaactgaat
atcgaccgggttaacgcccagcaggcgcgccgctttatggatcgcgtcgtgggctatatg
gtatcaccgctgctgtggaagaaaattgcccgcggcctgtccgccggccgcgtacagtcg
gtggccgtccgtctggtggtggagcgcgagcgcgatattaaagccttcgtgccggaagag
tactgggaactgcgcgccgacctgctggcgcagggtgaaaccgcgctgcagatggaagta
acccatgcgcacggcaaaccgttcaagccggtcaaccgcgagcagacccacgcggcggtg
gcgctgctggagaaagcgcgctacacggtgcaggatcgtgaagacaagccgaccagcagc
aagccgggcgcgccgtttatcacctccacgctgcaacaggcggccagcacgcgtctgggc
ttcggcgtgaagaaaaccatgatgatggcgcagcgtctgtatgaagcgggccacattacc
tatatgcgtaccgactctaccaacctgagccaggatgcgctcaatatggtgcgtggctat
atcggcgacagctttggcgagaaatacctgccgaaagcgccgaatcagtacagcagcaaa
gaaaattctcaggaagcgcacgaggcgattcgtccttcggacgtgaatgtggtggccgaa
cagctgaaagatatggaagcggatgcgcagaaactgtatcagctgatctggcgccagttt
gtcgcctgccagatgacgccggcgaagtacgattccaccacgctgacggtgaaagccggc
gactaccagctgcgcgccaagggccgcaccctgcgtttcgacggctggaccaaagtgatg
ccggcgctgcgtaagggtgatgaagatcgcaccctgccgtttgtagaaatcggcagcgat
ttggatctgcagcaactgctgccgagccagcactttaccaagccgccggcgcgttacagc
gaagcatcgctggttaaagagttggaaaaacgcggcatcggccgtccttccacctatgcg
tcgatcatctccaccattcaggaccgcggctacgtgcgggtggaaaaccgccgtttctac
gcggaaaaaatgggtgagatcgtgaccgaccggctggaagagaacttccgcgagctgatg
aactacgattttaccgcccgtatggaagatggcctcgaccaggtggcgaataaccacgcg
gagtggaaagcggtactggacgaattctttgccgagttcagcgaacagctggagacggcg
gaaaaagatcctgaagagggcggcatgcgcccgaaccagatggtgctgaccagcatcgcc
tgtccgacctgtggccgccagatgggcatccgcaccgccagcaccggggtattcctcggc
tgttccggctatgcgctgccgccgaaagagcgttgcaaaaccaccatcaacctggtgccg
gaagcggaagtgctgaacgtactggaaggcgatgatgcggaaaccaacgcgctgcgcgcg
cgccgccgctgccagaagtgcggcaccgcgatggacagctacctgatcgataaccagcgc
aaactgcacgtgtgcggcaacaacccggcctgcgacggttatgagattgaagagggcgaa
ttccgcctgaaaggctatgacggtccggtggtggagtgtgagaagtgcggttccgagatg
cacctgaagatggggcgcttcggcaagtacatgggctgcaccaacgaaaactgcaagaac
acgcgtaaaatcctgcgcagcggcgaagttgcgccgccgaaggaagatccggtgccgttg
ccggagctgccgtgcgccaagtcagacgcctatttcgtgctgcgtgacggcgcggccggc
gtgttcctggcggccaatactttccctaaatcgcgcgaaacccgtgcgccgctggtggaa
gagctgcagcgctttaaggaccgtctgccggagaaactgcgttacctggccgatgcgccg
gtcgccgatccggaaggcaacaaaaccctggtgcgctttagccgcaagaccaagcagcag
tacgtctcttcggagaaagagggcaaggccaccggctggaccgcgttcttcgtggacggc
aaatgggttgaaaccaaaaagtaa
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