Shewanella maritima: EXU30_06590
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Entry
EXU30_06590 CDS
T06365
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
smai
Shewanella maritima
Brite
KEGG Orthology (KO) [BR:
smai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smai03019
]
EXU30_06590
03009 Ribosome biogenesis [BR:
smai03009
]
EXU30_06590
Messenger RNA biogenesis [BR:
smai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EXU30_06590
Ribosome biogenesis [BR:
smai03009
]
Eukaryotic type
Pre-60S particles
RNases
EXU30_06590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBF82399
UniProt:
A0A411PFN1
LinkDB
All DBs
Position
complement(1530879..1531424)
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AA seq
181 aa
AA seq
DB search
MAANANNLIWVDLEMTGLEPAVDRIIEIATLVTDQDLNIIAQGPVLAIHQSDEVLDAMDD
WNQKHHGESGLIDRVKVSDVTEQEAIRQTIAFLQDYVPQGKSPMCGNSIGQDRRFLNKYM
PELEDYFHYRNIDVSTIKELVRRWQPETMNGFSKKNTHQALEDIKESIAELQFYREKVFN
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaatgcgaacaacttgatttgggtcgatttagaaatgacaggtttggagcct
gcagttgaccgtattattgaaattgccaccttagtgacagatcaagatttgaatattatc
gctcaagggcctgtactagcgattcatcagtccgatgaagtgttagatgcaatggatgac
tggaatcaaaagcatcatggtgaatctggcttgattgaccgagttaaagtcagtgatgtg
actgagcaagaggccattcgccaaaccatcgcattcctacaagattatgtcccacaaggt
aaatcacctatgtgtggtaacagcattggccaagatcgccgttttttaaacaaatacatg
ccagagctagaagactacttccactaccgcaacatcgacgtcagcaccattaaagagcta
gttcgtcgctggcagcctgaaaccatgaatggttttagcaagaaaaatacccaccaagct
ctcgaagacatcaaagagtccattgctgaattacagttttatcgcgagaaagtatttaat
atttaa
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