Serratia marcescens SM39: SM39_3905
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Entry
SM39_3905 CDS
T03592
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
smar
Serratia marcescens SM39
Pathway
smar03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM39_3905 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smar03032
]
SM39_3905 (dnaB)
Enzymes [BR:
smar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SM39_3905 (dnaB)
DNA replication proteins [BR:
smar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SM39_3905 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
divDNAB
ATPase
AAA_33
nSTAND3
CbiA
Motif
Other DBs
NCBI-ProteinID:
BAO35846
LinkDB
All DBs
Position
complement(4039664..4041088)
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AA seq
474 aa
AA seq
DB search
MAGKKPTNKINADETRERSRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVAERVVA
NDFFSRPHRLIFTEMQRLLEMSKPIDLITLSESLEQKGELDSVGGFAYLAELSKNTPSAA
NIGAYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRASKDE
GPKGIERILEDTVSRIEQLYQQPHDGVTGVDTGYQDLNKKTAGMQKSDLIIVAARPSMGK
TTFAMNLCENAAMTQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARI
SSTMGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHDGLSLIMIDYLQLMRVPALSDNR
TLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMF
IYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaaaaccaaccaacaaaataaacgcggacgaaaccagagagcgttccaga
gatcgtcagatggaagggctgaagatgccgccgcactcgctggaggccgagcagtcggtg
ttgggcggtttgatgctggataacgagcgctgggacaacgtggcggagcgcgtggtcgcc
aacgatttcttcagccgcccgcaccgcctgatctttaccgagatgcagcgtctgctggag
atgagcaagcctatcgacctcatcaccctgtccgaatcgctcgaacaaaagggcgaactg
gactcggtcggcggcttcgcctacctggccgagctgtcgaaaaacaccccgagcgccgcc
aacatcggcgcctacgccgacatcgtgcgcgagcgcgcggtggtgcgcgagatgatctcg
gtggctaacgagatcgccgacgccggctacgatccgcaggggcgcagcagcgaagacctg
ctcgatctggcggaatcccgcgtcttccaaatcgccgagaaccgcgccagcaaagacgag
ggcccgaagggcatcgagcgtattctggaagacaccgtgtcgcgcattgagcagctgtat
cagcagccgcacgatggcgtgaccggggtcgataccggctatcaggacctcaacaagaaa
accgcgggcatgcaaaagtccgatctgatcatcgtcgccgcccgtccttcgatggggaaa
accaccttcgccatgaacctgtgcgaaaacgccgcgatgacccaggaaaaaccggtgctg
atcttcagcctggagatgcccggcgagcagatcatgatgcgtatgctggcgtcgctgtcg
cgtgtggatcagacgcgcatccgtaccggccagcttgacgacgaggactgggcgcgcatt
tccagcaccatgggtatcctgctggagaagcgcaacatgtacatcgacgactcctccggc
ctgacgccgaccgaagtgcgctcgcgcgcgcggcgcattttccgcgagcacgacgggctt
agcctgatcatgatcgactacctgcagctgatgcgcgtgccggccctgtccgacaaccgt
acgctggagatcgccgagatttcgcgctcgctgaaggcactggcgaaagagctgcaggtg
ccggtggtggcgctgtcgcagctgaaccgaagcctggagcagcgcgccgataagcgcccg
gtcaactccgacctgcgtgagtccggctctatcgagcaggatgccgacctgattatgttc
atctatcgtgatgaggtgtatcacgagaacagcgatctgaaagggatcgcggaaattatt
atcggtaagcagcgtaacggcccgatcggcaccgtgcgccttacctttaacggccagtgg
tcgcgtttcgataactacgcggggccacaatacgatgacgaataa
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