Shewanella marisflavi: CFF01_04525
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Entry
CFF01_04525 CDS
T05400
Name
(GenBank) outer membrane protein assembly factor BamD
KO
K05807
outer membrane protein assembly factor BamD
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_04525
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_04525
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_18
TPR_6
TPR_16
TPR_2
TPR_17
TPR_8
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ASJ95914
UniProt:
A0A4Y6IXP1
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All DBs
Position
complement(1026787..1027545)
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AA seq
252 aa
AA seq
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MHNFAKGAAVALLSLALTACSSKPEDDIELSKSSPEVLYSQARTSMELGNYSKAIRSLEA
LDSRYPFGPHKTQVQLDLIYAYYKLDDSASGIANIDRFIRLNPTHKDIDYVYYMRGLVNM
QADNYMFHDMLNIDRTDRDPKAAQEAFKDFDRLIKSYPNSKYAADAQKRMQFLKNRLAKY
AITVAEYYIKMNAWSAAAVRAQTVLETYPGTPSTERALEIMATAYEELGQQKLKDHVLMV
MKTNYPNNDMLK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcataattttgctaaaggcgccgctgtcgccttgttgtcactggccttaacggcttgc
agtagtaaaccagaagatgatattgagctcagtaaatcttcccctgaagtcctctattct
caagcaagaacctctatggagttgggcaactatagtaaagcgattcgctctcttgaggcc
ttagattctcgctatcccttcggtccacataagacacaggtacagttagacctgatctat
gcatactacaaactggacgattctgcttctggtattgctaatatcgaccgctttatccgt
ctcaaccccactcataaagatatagactatgtctattacatgcgtggactggtaaacatg
caggccgataattacatgttccacgacatgctcaatatcgaccgaaccgatagagaccct
aaagcggcgcaagaagcctttaaagactttgaccgtttaataaagtcgtatcctaacagc
aaatacgctgccgatgcgcaaaaacgtatgcaattcttaaaaaatcgtcttgctaaatat
gcgatcaccgtggccgagtactatatcaagatgaatgcttggagcgccgcggccgtgcgt
gcccaaacggtattggaaacctatccaggtaccccatccaccgaacgcgccttggagatc
atggcgaccgcctatgaagaacttggtcaacaaaaacttaaagatcatgtgcttatggtg
atgaaaaccaactatcccaataacgatatgctcaagtaa
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