Sphingopyxis macrogoltabida 203: LH19_02055
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Entry
LH19_02055 CDS
T04627
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smaz
Sphingopyxis macrogoltabida 203
Pathway
smaz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH19_02055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smaz03400
]
LH19_02055
Enzymes [BR:
smaz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LH19_02055
DNA repair and recombination proteins [BR:
smaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH19_02055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ALJ11639
UniProt:
A0A0N7I0R3
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All DBs
Position
386639..388066
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AA seq
475 aa
AA seq
DB search
MREVVLKEPSDFAEWRRAARGLLAGGVAPEEVSWRGSAEGASLFGDAIAAAPVGQLSLPR
ELVEIAERVICHRDPEVPARLYRLVWRVLHDRHLLARTTDAEVDWLRKADKAIRRDVHKM
HAFVRFRRLGEEAGRESFAAWFEPTHRILRLTAPFFQRRFYGMDWAIVTPDARAIWQGET
LSYGPGGTRDEVPDSDVVEDQWRTYYGAIFNPARVKIDAMRAEMPKKYWKNLPEAQDIAP
LLAGAEARVERMREAAVSLANPLTDKWRTRVPDELLLDDDVKTLGDVARAVDRCTRCPLY
CNATQGVAGEGPQAARIMLVGEQPGDQEDLQGRPFVGPAGQVLDAALEEAGLDRTRLFLT
NAVKHFKFEPRGKRRLHQNPTVGEIDICRWWLDKERALVQPELIVTLGASALRGVTGKSA
SIKSMRGAVHELDGGTKLIATIHPSFLLRLPDRARAAEEREMFVADLALARKLAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaggtggtcctgaaggagccaagcgatttcgccgaatggcggcgcgcggcgcgc
gggctgctcgcaggcggtgtggcgccggaagaggtgagctggcgcggcagcgcggagggt
gcgtcgctgttcggcgatgcgattgccgcggcgcccgtggggcagctcagcctgccgcgc
gagctggtcgagatcgccgaacgcgtcatctgtcaccgagatccggaagtgccggcgcgg
ctttaccggctcgtctggcgcgtgttgcacgaccggcatctgctcgcgcgcacgaccgac
gccgaggtcgactggctccgaaaagccgacaaggcgatccgccgcgacgtccacaagatg
catgccttcgtccgcttccggcggctgggcgaggaggcggggcgcgaaagctttgcggcg
tggtttgagccgacgcatcgtatcttgcgcctgaccgcgcctttctttcagcggcgcttt
tacggaatggactgggcgatcgtgacccccgatgcgcgcgcgatctggcaaggcgagacg
ctgagctacggcccgggcgggacgagggacgaggtgcccgacagcgatgtcgtcgaggac
cagtggcgcacctattatggcgccatcttcaacccggcgcgggtgaagatcgacgcgatg
cgcgccgagatgccaaagaaatactggaaaaacctgcccgaagcgcaggatatcgcgccg
ctgctcgcgggcgccgaagcgcgggtggaacgcatgcgcgaggccgccgtttcgcttgcg
aaccccttgaccgataaatggcggacgcgcgtgcccgatgaattgctcctcgacgacgat
gtgaagacgctcggcgacgtcgcgcgcgcggtcgatcgctgcacgcgctgcccgctctat
tgcaacgcgacccagggtgtggcgggcgaggggccacaggcggcgcgcatcatgctcgtc
ggcgaacagccgggcgatcaggaggatctgcaggggcggcccttcgtcgggccggcgggg
caggtgttggacgcagcgctggaagaagcggggctcgaccgcacgcgcttgttcctgacc
aacgcggtcaagcatttcaagttcgagccgcgcggcaaaaggcggctgcaccagaatccg
acggtgggcgagatcgatatctgccgctggtggctcgacaaggagcgcgcgctggtgcag
cccgagttgatcgtaaccttgggcgcgagcgcgctgcgcggggtgacgggcaagagtgcg
agcatcaagtcgatgcgcggcgcggtgcacgaactggacgggggcaccaagctgatcgcg
acaatccatccgtccttcctgctgcgcctgcccgaccgcgcgcgcgccgccgaggaacgc
gagatgttcgttgccgatctggcgctggcgcggaaactcgcggcctga
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