Streptococcus mitis: smi_1925
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Entry
smi_1925 CDS
T01173
Symbol
uvrA
Name
(GenBank) excinuclease ABC-subunit A
KO
K03701
excinuclease ABC subunit A
Organism
smb
Streptococcus mitis
Pathway
smb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
smi_1925 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_1925 (uvrA)
DNA repair and recombination proteins [BR:
smb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
smi_1925 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
smi_1925 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_21
AAA_22
AAA_33
nSTAND3
AAA_23
AAA_18
ATPase
Viral_helicase1
BCA_ABC_TP_C
NACHT
MMR_HSR1
IIGP
cobW
T2SSE
DnaJ_CXXCXGXG
MeaB
NB-ARC
AAA_24
PRK
NTPase_1
AAA_19
Septin
DUF463
DUF87
Motif
Other DBs
NCBI-ProteinID:
CBJ23161
UniProt:
D3HBB1
LinkDB
All DBs
Position
complement(1980500..1983331)
Genome browser
AA seq
943 aa
AA seq
DB search
MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY
CINGHGAIKASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVVEKVQKDGYVRVRV
DGEVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDN
SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKTL
REGALAPWNPISSNYYPNMLEQAMTAFGVDMDKPFEDLSEEDKNLILYGSDGKEFHFHYE
NEFGGVRDIDIPFEGVVTNIKRRYHETNSDYTRTQMRLYMNELTCGTCHGYRLNDQALSV
RVGGEQGPHIGEISDLSIADHLELVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRAI
PVPTERRVGNGRFIEVIGARENNLQNITARFPLGKFIAVTGVSGSGKSTLINGILKKAIA
QKLNRNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLEVHY
KEKNISQILDMTVNDAVEFFQHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGTIIATGTPEEVAANEASYTGHYLKGKLHHE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaaattgtcattcatggggcgcgtgcccataatttaaaaaatattgatgtg
gagattccacgagacaagttggttgttgtaaccggcttgtcaggttcagggaaatccagt
ctggcctttgacaccctctatgctgagggacaacgtcgctatgtagagagtttgtcagcc
tatgctcgtcaattcttggggaatatggagaagccagatgtagatgccattgatggcctc
agtccagctatttctatcgaccagaaaacgactagcaaaaaccctcgctcgacggttgga
acaacgactgaaatcaatgactatctgcgtctcctctacgcgcgtgtggggacgccttac
tgtatcaacgggcacggggctatcaaggcttcttctgtagagcaaatcgtggataaggtc
ttggaattgccagaacgccagcgcctgcaaatcttggcccctgtcatccgcaagaaaaaa
ggccaacataagagtgttgtcgagaaggttcagaaagatgggtatgtccgtgtccgtgtg
gatggggaagtatatgatgtgaccgaagtgccagagttgtctaagagcaagcaacacaat
attgatgtcgtggttgaccgtattgttatcaaggagggtatccgtagtcgtctctttgat
tctattgaggctgcccttcgtattgcagaaggttatgtcattatcgacactatggacaat
tctgagttactcttttctgagcattatgcctgtccagtttgtggctttactgttccagag
ttagagccacgtctcttctcattcaatgctccttttggttcttgtagtgagtgtgacggt
ttgggcatcaagttggaggtggatactgatttggtagtgccagacgccagcaagacctta
cgtgagggagcgctagcaccttggaatcctatctcatccaactactatccaaacatgcta
gagcaggctatgacagcttttggagtggatatggataagccttttgaggacttgtcagaa
gaagataagaacttgattctctatggatcagatggtaaggaattccatttccactatgag
aatgaatttggtggcgtgcgcgatatcgatattccttttgagggagttgtcactaatatc
aagcgtcgctatcatgaaactaatagtgattacacacgcactcaaatgcgcctctatatg
aatgaattgacctgcggaacttgtcacggatatcgtctcaatgaccaggccttgtctgtc
cgtgtgggtggagagcaagggccacatatcggagaaatttcagacctgtctatcgcagac
cacttggaattagtcagtcagttgactctttctgaaaatgaagccatcatcgctcgtccc
attctcaaggaaatcaaggatcgtttgaccttccttaataacgtgggtcttaactatctg
actctgtctcgttcagcaggaaccctttcaggtggggaaagtcagcgtattcgcttggca
acccagattggttctaacctatcaggtgtcctttatatactagacgagccgtcaatcggt
ctccaccagagggacaatgatcgtttgattgccagtctcaaaaagatgcgtgatttgggt
aatactctcatagtagtggaacatgatgaagataccatgcgtgaggcggattatctgatt
gacgttggtcccggtgccggtgtttttggtggggaaattgttgcggcaggtacgcctaaa
caggtagctcgtaacagtaagtctatcacaggtcagtacttgtcagggaaacgtgccatt
ccagtaccaacagagcgccgtgttggtaatggtcgttttatcgaagtgataggtgcgcgt
gagaataacttgcaaaatattactgctcgattcccactaggaaaattcatcgcagtgaca
ggagtatctggttcagggaaatcgaccctaatcaacggtatcctcaaaaaagctattgcc
cagaagctcaaccgtaattcagacaagcctggtaaattcaagaccatcacagggattgag
catgtagaccgcttgattgacattgaccaaagtcctatcggacgaacgccgaggtccaac
cctgctacctatacaggagtttttgacgatatacgtgacctttttgctcagactaatgaa
gccaagattcgaggctacaagaagggtcgtttcagtttcaatgtcaagggtggtcgttgt
gaagcctgctcaggtgacgggattatcaagattgagatgcacttcttgccagatgtttat
gtggcttgtgaagtctgccatggaacccgctacaacagtgagactctagaagttcattac
aaggaaaaaaatatctcgcagatcttggatatgaccgtcaacgatgcggtagaattcttc
caacacattccaaagattcaacgcaaactccagactatcaaggatgtagggctaggatat
gtgaccttgggacagccagctaccaccctttctgggggagaagcccaacgtatgaaacta
gctagcgaactccacaaacgctcaacaggaaaatctttctacattctggatgagccgacg
acagggcttcatactgaggatattgctcgcttgctcaaggttttagctcgctttgttgac
gatggcaatacagttcttgtcattgagcacaatctggatgtcattaagacggcagaccat
attatcgatttgggacctgagggcggtgtcggtggtggaaccatcatcgcaacaggaact
ccagaagaagtagcggccaacgaagccagctacacaggacattatttgaaaggaaagtta
catcatgaataa
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integrated database retrieval system
