Sinorhizobium medicae: Smed_0308
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Entry
Smed_0308 CDS
T00555
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate lyase [EC:
4.1.3.1
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00630
Glyoxylate and dicarboxylate metabolism
smd01100
Metabolic pathways
smd01110
Biosynthesis of secondary metabolites
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
Module
smd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Smed_0308
Enzymes [BR:
smd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Smed_0308
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Motif
Pfam:
ICL
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
ABR59167
UniProt:
A6U687
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Position
complement(330900..332189)
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AA seq
429 aa
AA seq
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MTDFYKLVPNAPEGRFDGIERPYSAEDVKRLRGSVEIRYSLAEMGANRLWKLIHEEDFVN
ALGALSGNQAMQMVRAGLKAIYLSGWQVAADANTASAMYPDQSLYPANAAPELAKRINRT
LQRADQIETAEGKGLSVDTWFAPIVADAEAGFGGPLNAFEIMKAFIEAGAAGVHYEDQLA
SEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLVIARTDAEAAKLLTSDIDERDR
PFVDIDAGRTVEGFYQVRNGIEPCIARAIAYAPHCDLIWCETSKPDLEQARKFAEGVHKA
YPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFHQLNYGMFELARG
YKDRQMAAYSELQEAEFAAEANGYTATKHQREVGTGYFDAVSVAITGGQSSTTAMKESTE
HDQFRPAAE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttttacaagctcgttccaaacgcgccggaaggacgcttcgatggaatcgag
cggccctattccgcggaggacgtgaagcggctcaggggttcggtggagatccgttattcg
cttgccgaaatgggtgcgaaccgcttgtggaagctcattcacgaggaagacttcgtcaac
gcgctcggagcgctctcgggcaaccaggcgatgcagatggtacgcgcggggttgaaggcg
atctatctctccggctggcaggtcgcggccgacgcgaacaccgcttccgccatgtatccg
gatcagtcgctctatcccgccaatgctgccccggaactcgccaagcgcatcaatcgcaca
cttcagcgcgccgatcagatcgagaccgcggaaggcaagggtctctccgtcgacacctgg
ttcgcacccatcgtcgccgatgcggaagcaggcttcggtggcccgctcaacgccttcgag
atcatgaaggccttcatcgaggcaggcgccgctggcgtccactacgaagatcagctcgca
tccgaaaagaagtgcgggcatctcgggggcaaggtgctgatccctactgcggcccacatc
cgcaacctgaacgccgcgcggcttgccgccgatgtcatgggaactccgacgctcgtcatc
gcccgcaccgacgcggaggcggcgaagctgctcacctccgatatcgacgagcgggaccgc
cccttcgtcgatatcgatgccggccgtacggtggaaggcttctatcaggtgaggaacggt
attgaaccctgtatcgcccgcgcaattgcctatgcaccgcattgcgaccttatctggtgt
gaaacctccaagccggatcttgagcaggcgcggaaatttgcagagggtgttcacaaggcg
tatccgggcaagctgctcgcctataactgctcgccatccttcaactggaagaagaatctc
gacgacgcgaccatagcgaagttccagcgagagctcggcgcgatgggctacaagttccag
ttcatcacgctcgccggcttccaccagctgaactacggcatgttcgagctggctcggggc
tacaaggaccgtcagatggcggcctattcggaacttcaggaagccgaattcgcggcagag
gccaacggctatacggcgactaagcaccagcgcgaagtcggcacaggctatttcgacgcc
gtgtcggttgcgatcacgggcggacagtcctcgaccaccgccatgaaggaatccaccgag
cacgaccagttccgcccggcggcagaatga
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