Sinorhizobium medicae: Smed_2077
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Entry
Smed_2077 CDS
T00555
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00470
D-Amino acid metabolism
smd00550
Peptidoglycan biosynthesis
smd01100
Metabolic pathways
smd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Smed_2077
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Smed_2077
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Smed_2077
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Smed_2077
Enzymes [BR:
smd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Smed_2077
Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Precursor biosynthesis
Amino acid ligase
Smed_2077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATPgrasp_ST
CPSase_L_D2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ABR60910
UniProt:
A6UB80
LinkDB
All DBs
Position
complement(2132737..2133663)
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AA seq
308 aa
AA seq
DB search
MSSKHVAVLLGGFSSERPVSLSSGTACADALEGEGYRVTRVDVGHDVAAVLQELRPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKAQAKHVAKAAGIPVAEAVVMDR
RSFGNQHPMKPPYVVKPVREGSSFGVVIVKEDQSHPPQVITSSDWRYGDRIMVERYVAGR
EFTCGVMGDVALGVTEIIPQGHAFYDYDSKYVKGGSKHVIPAQVSPNIYQKIQTLALKAH
QAIGCRGVSRSDFRFDDRGDGEGELIWLEINTQPGMTPTSLVPEMAQHAGLRFGEFLRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagcatgtcgctgtcctgttgggcggattttcctcggagaggccggtgagc
ctgtcttcggggacggcttgcgcggatgctctggaaggcgaaggctatcgcgtcacgcgc
gtcgatgtcggtcacgacgtcgcggcggtgcttcaggaattgcgcccggatgtggtcttc
aacgcgcttcacggaccattcggcgaagacggaacgattcagggaatcctcgaatatctc
gaaattccctatacccattcgggcgttcttgcctctgcgctggccatggacaaggcccag
gcaaagcatgtcgccaaggccgccggtattccggttgccgaggcagtggtcatggaccgc
cgcagcttcggcaatcagcatccgatgaagcccccctacgtggtgaagccggtgcgagag
gggtcgagcttcggcgtggtgatcgtcaaggaggatcagtcgcatccgcctcaggtgatc
acctcgagcgactggcgctacggcgaccgcatcatggtcgagcgctacgttgcaggacgc
gaattcacctgcggcgtcatgggcgatgtcgctcttggcgtcactgagatcattccgcag
gggcatgccttctacgattacgactctaaatacgtaaaaggtggctcgaagcacgtcata
ccggcacaggtttcaccaaatatttaccaaaaaatacaaacactggctttgaaggcgcat
caggcgatcggttgccgcggcgtcagccggtccgactttcgtttcgacgatcgtggcgat
ggtgagggcgagttgatctggctcgagatcaacacccaacccggcatgaccccaacctcc
ctggtgcccgaaatggcgcagcatgcgggccttcggtttggtgaatttctcaggtggatg
gtggaggacgcgtcgtgcttgcgttga
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