Sinorhizobium medicae: Smed_3432
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Entry
Smed_3432 CDS
T00555
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smd
Sinorhizobium medicae
Pathway
smd03030
DNA replication
smd03430
Mismatch repair
smd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Smed_3432
03430 Mismatch repair
Smed_3432
03440 Homologous recombination
Smed_3432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smd03032
]
Smed_3432
03400 DNA repair and recombination proteins [BR:
smd03400
]
Smed_3432
Enzymes [BR:
smd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Smed_3432
DNA replication proteins [BR:
smd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Smed_3432
DNA repair and recombination proteins [BR:
smd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Smed_3432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
AAA_24
AAA_19
AAA_18
RuvB_N
DUF815
SKI
TsaE
SRP54
AAA_assoc_2
AAA_33
CbiA
nSTAND3
Rad17
NTPase_1
AAA_28
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABR62250
UniProt:
A6UF20
LinkDB
All DBs
Position
3636635..3638512
Genome browser
AA seq
625 aa
AA seq
DB search
MSDEAPTSIPISSVEKPAAYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYM
LTGVRGVGKTTTARILARALNYKTTGIDKPTIDLRLPGEHCQAIMDGRHVDVIEMDAASH
TGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTE
IRKVPITVLSRCQRFDLRRISASDLVGLFSTILGKEGVPFDPEALAMVARAAEGSARDGL
SLLDQAIAHGGGSVEVETVRSMLGLADRARIVDLFEHIIKGDVAAALHEFAAQYEAGANP
TVVLTDLADFTHLVTRLKYVPDAINDQSLSEIERRHGAEFAGSVAVTTLSRIWQMLLKGI
PEAESSARPAGAAEMVLIRLAHAAHLPSPEEAARRLLDLSGSEGAGRPSPNGGGGGGGAQ
AFAAASVEARAVATGASRASGNGATMLRAVPNSAAQPVEVGRIEERPIASPAAKPEPKVP
VNSVGDIADLCAKNRDIKLKTLVRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKEW
TGIHWVVSYSREQGEPTLAEAEQRAQEQRVNDAREDPVVAAILARFPGARITDVRIRAAE
EEIENLAPAAAESEDGDIVPGDDIE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaagcgcccacttcaatcccgatttcatccgtcgagaagcccgccgcctac
cgtgttctggcgcgcaaataccgccccaaggacttctccgatctgatggtcggacaggag
cctatggtgcgtacgctcaccaacgccttcgagaccggccgcatcgctcaggcctatatg
ctgaccggcgtgcgcggagtcggcaagacgacgacggcgcgcatcctggcgcgggcgctg
aattacaagaccaccgggatcgacaagcccaccatcgacctgaggctccccggcgagcac
tgccaggcgatcatggacggccgccatgtcgacgtgatcgagatggacgccgcctcgcat
accggcatcgacgatatccgcgagatcatcgagcaggtgcgctaccggccggtatcggcg
cgctacaaggtgtatatcatcgatgaagtgcacatgctctcgacgcaggccttcaatggg
ctgctgaagacgctcgaggagccgccggagcatgtgaagttcattttcgcgacgacggag
atccgtaaggttccgattaccgttctgtcgcgctgccagcgcttcgatctgcggcggatc
agcgcttccgatctggtcggtctcttttccaccattctcggcaaggagggtgttcccttc
gatccggaggcattggcaatggtcgcccgcgcggcggaaggctcggcgcgtgacggcctg
tcgctgctcgaccaggcgatcgcccatggtggcggctcggtcgaggttgaaaccgtgcgc
tcgatgctcggacttgccgacagggcgcggatcgtcgatcttttcgagcacatcataaag
ggcgatgtcgccgccgcgctgcacgaattcgccgcgcaatatgaagcaggcgccaatccg
acggtagtcctgacagaccttgccgacttcacccatctggtgacacggctgaaatatgtg
cctgatgcgatcaacgaccaatccctgagcgagatcgagcgtcggcacggggcggaattc
gccggcagcgttgccgtgacgacgctgtcgcgcatctggcagatgctgctcaagggcata
cccgaggcggagagttcggcgcgccccgcgggtgctgccgagatggtgctgatcaggctt
gcccatgcggcccatctgccttcgcccgaagaggcggcccggcggctcctcgatctttcg
ggcagcgaaggagccgggcgcccgtcgccgaatggcggtggcggtggcggtggtgcgcag
gcgtttgccgccgcgtcggtcgaggctcgcgccgtagcgacgggtgcgtcgcgcgccagc
ggcaacggcgcgaccatgctgcgcgcggtgccgaactcggcggcgcaaccggtcgaggtt
ggccgcatcgaagagcgtccgattgcaagcccggctgcgaagcccgaaccgaaggtgccg
gtcaactcggtcggcgacatcgccgatctctgcgcgaagaaccgggatataaagctgaag
acgctggtgcgtggtttcctgaggctcgtgcatatcgagcccggccggctcgacgtcaac
ctgcccgacgatgcgccgaagacgctcttgaacgaactcgccgtcaagctcaaggagtgg
accgggatccattgggtcgtgagctacagccgcgaacagggcgagccgaccctggccgag
gccgagcagcgcgcccaggaacagcgcgtcaacgatgcgcgcgaagatcctgtcgtcgct
gccattcttgcgcgctttcccggcgcgaggatcacagatgttcgcatccgcgcggcggaa
gaggagatcgagaacctcgcaccggccgcggccgaatccgaggacggcgatatcgtcccg
ggggacgatatcgaatag
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