Sinorhizobium medicae: Smed_3925
Entry
Smed_3925 CDS
T00555
Definition
(RefSeq) ribulose-bisphosphate carboxylase
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00630
Glyoxylate and dicarboxylate metabolism
smd00710
Carbon fixation in photosynthetic organisms
smd01100
Metabolic pathways
smd01120
Microbial metabolism in diverse environments
smd01200
Carbon metabolism
Module
smd_M00166
Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Smed_3925
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Smed_3925
Enzymes [BR:
smd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Smed_3925
SSDB
Motif
Pfam:
RuBisCO_small
Other DBs
NCBI-GeneID:
5318761
NCBI-ProteinID:
YP_001312668
UniProt:
P56890
LinkDB
Position
pSMED01:378252..378641
AA seq
129 aa
MRITQGCFSFLPDLTDEQITAQVEYCLGRGWAIGVEYTDDPHPRNTYWEMWGNPMFDLRD
AKGVMMEVEDCRKAHPQDYIRLNAFDSSRGLETVTMSFIVNRPENEPSLRMTRTESDGRS
QHYTWETQR
NT seq
390 nt
+upstream
nt +downstream
nt
atgcgtatcacccagggatgcttctcgttcctgccggacctgacggacgagcagataacg
gctcaggtggaatattgcctcggaaggggctgggctatcggcgtcgaatacaccgacgac
ccgcatccccgtaacacctattgggaaatgtggggcaatccgatgttcgacctgagggac
gcaaaaggcgtgatgatggaggtggaggattgccgcaaggctcatccccaggactatatc
cgactgaacgccttcgattccagccgcggccttgagacggtgacgatgtccttcatcgtc
aaccgtcccgagaacgaaccgagcctcaggatgacccgaacggagagcgacggccgcagc
cagcactatacgtgggaaacacagcgatag
DBGET
integrated database retrieval system