Sinorhizobium medicae: Smed_5008
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Entry
Smed_5008 CDS
T00555
Name
(GenBank) regulatory protein LacI
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
smd
Sinorhizobium medicae
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smd03000
]
Smed_5008
Transcription factors [BR:
smd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Smed_5008
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_31
Peripla_BP_1
HTH_3
HTH_26
HTH_7
Hydrolase
HTH_IclR
MerR
Motif
Other DBs
NCBI-ProteinID:
ABR63789
UniProt:
A6UJF9
LinkDB
All DBs
Position
pSMED01:1525936..1526967
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AA seq
343 aa
AA seq
DB search
MTRRPTIADLARASGVSVATVDRVLNGRHPVREETARRVYDAAKAIGYHAVGLLRQRVFE
DLPQFRLGFLLQKPEQSFYKALAKEIENAALAVTHVRAVPQVDFVASSTPQGIIEKLKAM
AARNQAIALVSPDYPAVTAAVEDLRDRGIPVVALLSDFAAGVREAYVGLNNQKVGRTAAW
MIAKAAKRPGKVAAFVGSHRFHGHELREIGFRSYFRENAPEFEVLDTMVNLDTPEITHEA
TLDLLQRHPDVLGFYVCGGGMEGAISAIREERLEGKLLVVVNELTPESRAALADETLLMA
ISTPASALARESVSLMIGAIDREAASVPGQTFLPFDIYTPENI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgagacggccgacgattgcggatctggcccgcgcatcaggcgtgagcgttgcaacg
gtcgatcgcgtgctgaacggccgtcatccggtgcgcgaggaaacggcgcgccgcgtctac
gatgcggcgaaggcgatcggctaccacgcggtcggcctgcttcgccaacgggttttcgag
gacctgccgcaatttcggctcggctttctcctgcagaagccggagcaatcattctacaag
gcgctcgcaaaggagatcgaaaacgcggcccttgcggtgacgcatgtgcgtgccgttccg
caggtggatttcgtcgcaagctccacgccgcaagggatcatcgaaaagttgaaggccatg
gcggcgcgcaatcaggcgatcgccctggtgtcgccggattatccggccgtgaccgccgcg
gtcgaggacctcagggatcgcggcattcccgtcgtcgcactgctttccgactttgccgcc
ggcgtgcgcgaggcctatgtgggcctcaacaatcagaaggtcggcagaacggcggcatgg
atgatcgccaaggcggcgaagcgtccgggaaaggtcgccgccttcgtcggcagccaccgc
ttccatggacacgagctgcgcgagatcggctttcgttcgtattttcgcgaaaacgcaccc
gagttcgaagtcctcgacacgatggtgaacctcgacacgcccgagatcacccatgaggca
acgctcgatctcctgcaacgccaccccgatgtcctcggtttctacgtctgtggcggcggc
atggagggtgccatttcggcgatccgggaggaaaggctcgagggcaagctgctcgtggtc
gtcaacgagctgacgccggaatcgcgcgcggcactcgccgatgaaacattgcttatggcg
atctcgacgcccgcctcggcattggcccgggaatcggtgagcctgatgatcggcgcgatc
gaccgggaggccgcgagcgtgcccggccaaaccttcctgcccttcgacatctacacgccc
gagaacatctga
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