Sinorhizobium medicae: Smed_5079
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Entry
Smed_5079 CDS
T00555
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02033
peptide/nickel transport system permease protein
Organism
smd
Sinorhizobium medicae
Pathway
smd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Smed_5079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_5079
Transporters [BR:
smd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Smed_5079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
BPD_transp_1_N
Motif
Other DBs
NCBI-ProteinID:
ABR63858
UniProt:
A6UJM8
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All DBs
Position
pSMED02:complement(26382..27299)
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AA seq
305 aa
AA seq
DB search
MMLGYIGRRAYHSVISVIGLLTLVFFLTRLTGDPSALYLPLDSSLEARQAFARLNGLDQP
IYVQFFQYLHNLLSLDFGQSLRQNRSAIEVALEAFPATLKLAVVAMTLSIALAIVVGALA
AARPGSLFDRIAGLVSLAGASTPDFWIAIVGILVFAVGLGVLPTSGTGSGLHWIMPIFVL
MLRPFGLLVQVVRGTMISALASPFIKTAHAKGMKRRKIIFGHALRNSLLPVITVAGDLAT
GLINGAVVVETIFGWPGIGKLMIDSIIQRDFAVVQSTILVTAIAIFIVNIAIDLLYAVLD
PRIRY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcggctatatcggccggcgggcatatcacagcgtaatttcggtgatcggcctg
ctgacgctcgtctttttcctcacgcgcctgaccggcgacccgtcggcgctctacctgccg
ctcgactccagcctcgaggcgcgccaggcctttgcacgcctcaacggcctggaccagccg
atctacgtgcaattcttccagtacctgcataaccttttgtcattggatttcggccagtcc
ttgcggcagaaccggtcggcgatcgaggtggctctcgaggcctttccggccacgctgaag
ctcgctgtggtcgccatgacgctctcgatcgctcttgcgatcgtcgtcggcgcgctggcc
gctgcccgtcccggaagcctgttcgaccgcatagccggactcgtttccctggcgggtgcg
agcacgcccgatttctggatcgcgattgtaggcattcttgttttcgccgtcggcctcggc
gtactgccgacctcgggcaccggctccggattgcactggatcatgccgatcttcgtgctg
atgctgcgccctttcgggctgctggtacaggtggtgcggggcacgatgatttcggcgctc
gcctcccccttcatcaagacggcccatgctaagggcatgaagcgtcgtaaaatcatattc
ggtcacgcgctcagaaactcgctgctgcccgtcatcacggttgccggcgatctggccacc
ggcctgatcaacggcgctgtcgtcgtcgaaacgattttcggctggcctggcatcggcaag
ctgatgatcgattccatcatccagcgcgactttgccgtggtgcaatcgacgatcctcgtc
acggcaatcgccattttcatcgtcaacatcgcgatcgatcttctctacgcagtgctcgat
ccgcgcatccgctactga
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integrated database retrieval system