KEGG   Sinorhizobium medicae: Smed_5079
Entry
Smed_5079         CDS       T00555                                 
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
  KO
K02033  peptide/nickel transport system permease protein
Organism
smd  Sinorhizobium medicae
Pathway
smd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Smed_5079
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:smd02000]
    Smed_5079
Transporters [BR:smd02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Smed_5079
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N
Other DBs
NCBI-ProteinID: ABR63858
UniProt: A6UJM8
LinkDB
Position
pSMED02:complement(26382..27299)
AA seq 305 aa
MMLGYIGRRAYHSVISVIGLLTLVFFLTRLTGDPSALYLPLDSSLEARQAFARLNGLDQP
IYVQFFQYLHNLLSLDFGQSLRQNRSAIEVALEAFPATLKLAVVAMTLSIALAIVVGALA
AARPGSLFDRIAGLVSLAGASTPDFWIAIVGILVFAVGLGVLPTSGTGSGLHWIMPIFVL
MLRPFGLLVQVVRGTMISALASPFIKTAHAKGMKRRKIIFGHALRNSLLPVITVAGDLAT
GLINGAVVVETIFGWPGIGKLMIDSIIQRDFAVVQSTILVTAIAIFIVNIAIDLLYAVLD
PRIRY
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatgctcggctatatcggccggcgggcatatcacagcgtaatttcggtgatcggcctg
ctgacgctcgtctttttcctcacgcgcctgaccggcgacccgtcggcgctctacctgccg
ctcgactccagcctcgaggcgcgccaggcctttgcacgcctcaacggcctggaccagccg
atctacgtgcaattcttccagtacctgcataaccttttgtcattggatttcggccagtcc
ttgcggcagaaccggtcggcgatcgaggtggctctcgaggcctttccggccacgctgaag
ctcgctgtggtcgccatgacgctctcgatcgctcttgcgatcgtcgtcggcgcgctggcc
gctgcccgtcccggaagcctgttcgaccgcatagccggactcgtttccctggcgggtgcg
agcacgcccgatttctggatcgcgattgtaggcattcttgttttcgccgtcggcctcggc
gtactgccgacctcgggcaccggctccggattgcactggatcatgccgatcttcgtgctg
atgctgcgccctttcgggctgctggtacaggtggtgcggggcacgatgatttcggcgctc
gcctcccccttcatcaagacggcccatgctaagggcatgaagcgtcgtaaaatcatattc
ggtcacgcgctcagaaactcgctgctgcccgtcatcacggttgccggcgatctggccacc
ggcctgatcaacggcgctgtcgtcgtcgaaacgattttcggctggcctggcatcggcaag
ctgatgatcgattccatcatccagcgcgactttgccgtggtgcaatcgacgatcctcgtc
acggcaatcgccattttcatcgtcaacatcgcgatcgatcttctctacgcagtgctcgat
ccgcgcatccgctactga

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