Sinorhizobium meliloti 1021: SMc00150
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Entry
SMc00150 CDS
T00058
Name
(GenBank) Putative membrane protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sme
Sinorhizobium meliloti 1021
Brite
KEGG Orthology (KO) [BR:
sme00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sme01002
]
SMc00150
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sme01011
]
SMc00150
Peptidases and inhibitors [BR:
sme01002
]
Cysteine peptidases
Family C82
SMc00150
Peptidoglycan biosynthesis and degradation proteins [BR:
sme01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SMc00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CAC46437
RhizoBase:
SMc00150
UniProt:
Q92K91
LinkDB
All DBs
Position
complement(2017892..2019787)
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AA seq
631 aa
AA seq
DB search
MRIIKSAAIVTLMSGCVVATMDVQPASAITFMDFIRGGKKRDVQEQVQPRRQLPGVDMFA
PQRLDQKAAKPPRITGPRYYTYKAEPLRRIATDRLVDPVVTGSVLNGALPPMLRSPLADA
RQFLPEVDVRAPAEVAKAVENFYGTRTDFLWIEGTGVSGRAKAALGVLSDAAKVGLDPLD
YAVIVPPEDFDRGDMIAREKDLVRFEIAMSAAVLTYVQDTVRGRIDPNRISGYHDFKRKN
VDLLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAAPRVEIAPGTLLKP
GESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADG
IVGQASIRALTGGDTTQGKIDKVEIAMEQARWLPDGLGDRYVFINQPAFTASYTEQGTEQ
FSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVE
VGGRVVPSTAVNWYGSTNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQ
RALSHGCVRLADPRRMAAAVLGVSVDEVGMEISGGRNKALPVSAKVPVYVSYFTAWPNKD
GTVEYFDDVYERDMYMNRAFEATRKARSLEG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcatcaagtcggcagcgattgtcacgctcatgagtggctgtgtggttgcaacc
atggatgtgcagccggcgtctgcaatcaccttcatggacttcatccgcggaggcaagaag
cgcgacgtgcaggagcaggtgcagcctcggcggcagcttccgggcgtggacatgttcgcg
ccgcagcggcttgatcagaaggcggcgaagccaccgcgcatcaccggcccgcgctattat
acctacaaggcggagccgctgcgccggatcgcgacggatcgtctggtcgatcccgtcgtc
accggctcggtgctgaacggggccctgccgcccatgctgcgctcgccgcttgccgacgcg
cgccagtttcttccggaagtcgatgtgcgcgcccccgccgaggtcgcaaaagccgtcgag
aatttctacggcacgcggacggatttcctgtggatcgaggggacgggcgtcagcggccgt
gccaaggcggcgcttggcgtcttgtccgacgctgcgaaggtcggtctcgacccgctcgac
tacgccgtcatcgttcctccggaagatttcgaccgcggcgacatgatcgcccgcgagaag
gatctggtgcgtttcgaaatcgcgatgtccgcggccgtgctcacctatgtccaggatacc
gtgcgcggccgtatcgatccgaacaggatctccggctatcacgacttcaagcggaaaaac
gtcgatcttctcggctttctggagaagatcgagacaagcagtgatgtcgcggcgcttgtc
gaaagtcagaatccgaaaagcgcacaatttaccgcattgaggcaggaactcgagcggctt
cggacgcaggtggaagccgcgccgcgggtggagatcgcaccggggacgttgttgaagccc
ggcgaaagcaatccggaactcgcgaatgttatcgccggaatcaagttgaaagcctcggaa
gcgttgaagacggagcatgcggtcgtgctcgcggcctatgaggggacgccggactacacg
cccgagctggtgccgctcgtcgaggccttccagaaggaatatggcctgaaggcggatggc
attgtcgggcaggcgtcgatacgcgccctcaccggcggcgatacgacccaaggaaagata
gacaaggtcgaaatcgcgatggagcaggcgcgctggttgccggatgggcttggcgaccgc
tatgtcttcatcaaccagccggccttcaccgcgtcctatacggaacagggcacggagcag
ttctccatgcgcgtggtcgtcggttccaaggccaaccagacatatttcttccaggacgaa
atccagacggtcgaagtaaatccctattggggcgtgccgcagtcgatcatcgtcaacgaa
atgctgccgaagcttagaaacgacccgggttacctggaccgcatgggttatcaggtggaa
gtcggcggccgcgtcgttccttccaccgcggtgaactggtacggatcgacgaactcgatc
gccgtgcgccagccgccgagcagcgacaatgcgctcggcgaactcaagatactcttcccc
aacgcgcacgcgatctatatgcacgacacgccgtcgaagagcttcttcaagcgcgaccag
cgggcgctaagccatggctgcgtgcgtcttgccgatccccggcgcatggcggcggcggtt
ctgggcgtaagtgtcgacgaggtcggcatggaaatatcgggcggccgcaacaaggcgctg
ccggtatccgccaaggtcccggtctatgtttcctactttaccgcctggccgaacaaggac
ggaaccgtcgagtatttcgacgacgtctacgaacgcgatatgtatatgaatcgcgctttc
gaggccacgcgcaaggcgcggagtctggaaggatga
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