Sinorhizobium meliloti 2011: SM2011_b20108
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Entry
SM2011_b20108 CDS
T02497
Name
(GenBank) Putative ABC transporter periplasmic oligopeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
smel
Sinorhizobium meliloti 2011
Pathway
smel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
smel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM2011_b20108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smel02000
]
SM2011_b20108
Transporters [BR:
smel02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SM2011_b20108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AGG71106
LinkDB
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Position
pSymB:118703..120211
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AA seq
502 aa
AA seq
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MTIRYCTRAVALLTATLFSGVAMAAEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITE
TLTVIDTEKGTVGPWLAEKWEQVDDLTWRVHLKSGVKFQDGAAFDAEAVVKSINRLMNPG
LTCDSRSKFGDVKLTPKAVDAQTVEISSDSPVPIMPTLLGTVQIVSPNMPFDKESNDPVG
TGPYVVESKSNEQIVLKRHDAYWGAKPDVTRATYVWRSESAIRAAMVESGEADMTPSIAV
QDATNAESDFAYLNSETTRMRIDAQIPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRAS
QMVVPGVRGHNPDIKPWTYNPEEAMKLVEEAKAAGAPVDKEIVLIGRNGFFPNSAESLEA
MRSMWQEIGLNVSIRQLEAADWVRYLDKPFPEGRGPTLFQQQHDNNTGDAGFTAPVMYLS
EGQYSTIADPDLDVVLKKAMAATGDEREKLFQEVFAKVHDEIVADVPMYHMIGYVRVGSR
LDWKPDLKTNSEIALSEIHFKD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctattgtacccgcgccgtggcgctcttgaccgcgacgctcttttccggc
gtcgcgatggccgccgaaggcgaggtgaagatcgtattgccggagcagccggccaacctc
gatccctgtcgctccatcaggtcggatatcggccgcatcatcaattccaacattaccgag
accctgaccgtcatcgacacggagaagggcaccgtcggcccctggcttgctgaaaaatgg
gagcaggtggacgatctgacctggcgtgtgcatctcaagagcggcgtcaagtttcaggac
ggcgcggcgttcgatgccgaagcggtggtcaagtccatcaaccgcctgatgaaccccggc
ctcacctgcgacagccgctcgaaattcggcgacgtcaagctgacgccgaaggcggtcgat
gcgcagacggtggagatctcctccgacagcccggtgccgatcatgccgacgctgctcggc
accgtgcagatcgtctcccccaacatgccgttcgacaaggaaagcaacgatcccgtcggc
acgggaccctatgtggtcgaaagcaagtccaacgagcagatcgtcctgaagcgtcacgat
gcttactggggcgccaagccggacgtcacgcgcgcaacctatgtctggcgcagcgagtcg
gccatccgggcggccatggtcgaatccggcgaagcggacatgaccccatccatcgccgtg
caggacgccaccaatgccgagtctgactttgcctatctgaactccgagacgacccgcatg
cgcatcgatgcgcagatcccgccgctcgatgatgtccgcatccgcaaggcgctcaacatg
gctatcgactgggacggcatgggcgaagcgctgttcggcaaggacgtcctgcgggcctcg
caaatggtcgttccgggcgtgcgcggccacaatcccgatatcaagccatggacctacaat
cccgaagaggcgatgaagctggtcgaggaagccaaggccgcaggcgctccggtcgacaag
gagatcgtgctgatcgggcgcaacggcttcttcccgaactcggccgaaagcctcgaagcg
atgcgatccatgtggcaggagatcgggctcaacgtctcgatacgccagctcgaagcggcc
gactgggtgcgctatctcgacaagcccttcccggagggacgcgggccgacgcttttccag
cagcagcacgacaacaatacgggcgacgccgggtttaccgctccggtcatgtatctgagc
gagggacaatattcgacgatcgccgatcccgacctcgacgtcgtgttgaagaaagccatg
gccgcgaccggcgacgagcgtgaaaagctgtttcaggaggtcttcgcgaaggtgcacgac
gaaatcgtcgcagacgtgccgatgtaccacatgatcggctatgtccgcgtcggctcgcgc
ctcgactggaagccggatctcaagacgaacagcgagatcgcgctctccgagatccatttc
aaggactga
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