Sinorhizobium meliloti RMO17: DU99_06170
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Entry
DU99_06170 CDS
T03395
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
smer
Sinorhizobium meliloti RMO17
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smer03016
]
DU99_06170
Enzymes [BR:
smer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DU99_06170
Transfer RNA biogenesis [BR:
smer03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DU99_06170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIL99012
UniProt:
A0AA91AAY5
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All DBs
Position
complement(1284643..1285794)
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AA seq
383 aa
AA seq
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MIQTTADLEAACRELARSSYITIDTEFLRETTFWPVLCLIQMASPEMAVIVDPMAPGIDL
APFFALMSNPDVVKVFHAARQDIEIIHHLGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVN
RIKNEQIDKSSRFTDWSRRPLTDKQLDYALADVTHLRDIYQYLTKELDREGRSSWLAEEM
AILESRETYDLHPDNAWQRLKMRVKKPIELAVLQKVAAWREREARARNVPRGRIIKDDAI
YEIAQQQPKDAEALGRLRTIPKGWERSSAGTALIEAVGEALAIPRGELPRLPRQNHAPEG
AAAASELLKVLLKLISEKEGVAAKIIANSDDLDRIAAEGEGADVAALKGWRRELFGMTAL
KLINGEVALRFVDKKVEAMEIGG
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaacgacagcagatcttgaggccgcctgccgagagctggcccgttcaagctat
attacgatcgatacggagttcctgcgcgaaaccacgttctggccggtgctgtgcctcatt
cagatggcaagcccggaaatggcagtgatcgtcgatccgatggcacccgggatcgacctc
gccccgttcttcgcgctgatgagcaacccggatgtcgtgaaggtgttccacgccgccagg
caggacatcgagatcatccaccatctcggaaatctcattcctcatccgatcttcgatacg
caggtggccgcgatggtttgcggcttcggtgacagcgtgtcctatgaccagctcgtcaac
cgcatcaagaacgagcagatcgacaagtcgtcccgcttcaccgattggagccgcagaccg
ctcaccgacaagcagctcgactatgcgctggcggacgtgacgcatctgagggatatctac
cagtacctcaccaaggaactggatcgcgagggacgctcctcatggcttgcggaggaaatg
gcgatcctcgaaagccgggagacctacgatctccacccggacaatgcctggcagcggctg
aagatgcgggtgaagaaacccatcgagctcgccgtcctgcagaaggtggcggcgtggcgc
gaacgcgaagcgcgcgcccgcaacgtgccgcgcgggcgaattatcaaggatgatgcgatc
tatgagattgcgcagcagcagccgaaggatgccgaggcgctcggacgcctcaggaccatt
cccaagggctgggagcgctccagcgcggggacggccctcatcgaggcagtcggcgaagcc
cttgcgatcccgaggggcgagctgccgcgcctgccgcgccagaaccacgcacccgagggc
gctgcggcggcgagcgagctgctcaaggtgctgctgaaactcatctccgaaaaggaggga
gtcgcggccaagatcatcgccaacagcgacgatctcgacaggatcgcagccgagggcgaa
ggtgcggacgtcgccgcgctcaagggctggcggcgtgagctcttcggcatgacggcgctg
aaactcatcaacggcgaggtggcattgcgcttcgtcgacaaaaaagtcgaggcgatggaa
atcggcggttga
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