Sinorhizobium meliloti RMO17: DU99_19540
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Entry
DU99_19540 CDS
T03395
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DU99_19540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smer03400
]
DU99_19540
DNA repair and recombination proteins [BR:
smer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DU99_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AIM01497
LinkDB
All DBs
Position
pSymA:complement(309053..309859)
Genome browser
AA seq
268 aa
AA seq
DB search
MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKE
EDEVKGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSIEWIWLDTPYYLSPNDP
VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSYF
EAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLEIIAAKKKALKPQKAQGKT
APSSSPSNVVSIMDALRKSVAAEKRATK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgtccctattggaaaggctatctcaaactctcgctcgtcacctgtccggtg
cagatgatgccggcgacctccgaaagcgagaaggtccgctttcataccctcaatcgccag
acccaaaaccgcgtcgtcagccactacgtcgactccgtgaccggcaaggaggtcaaggaa
gaggatgaggtgaagggctatcagcgaggggagcacgaatacgttattctcgaagacgag
gagcttgagaacgttgctctcgaaagcaccaagacgatcgacatctccacattcacgccg
cgcgatagcatagagtggatctggctcgacacaccctattatctctcgcccaacgatcct
gtcggacaggaggcattttccgtgatccgcgacgcgatggaggcgcagaacatggtcggc
atatcccggctagtgatctcacgccgcgagcgtgccgtcatgctcgagccacgtggtaag
ggtatcgttctgtggacgctgcgctacggagacgaagttcgcgatgaagacagctatttc
gaggcgatcggcgatgaacaggccgattccgagatgatgccgctcgtccagcagttgatc
aaaaagcagaccaaggactggaccccgaaaatggtcgccgacccggtccaggagcggctg
ctcgaaatcatcgcagccaagaagaaggcgttgaagccgcagaaggcccagggcaagaca
gcaccttcgtcgtcgccgagcaatgttgtcagcatcatggatgccttgcggaaatcagtc
gcggctgagaaacgggcgaccaaatga
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