Sinorhizobium meliloti Rm41: BN406_00056
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Entry
BN406_00056 CDS
T02332
Symbol
dapE
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00300
Lysine biosynthesis
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
smi01230
Biosynthesis of amino acids
Module
smi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN406_00056 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smi01002
]
BN406_00056 (dapE)
Enzymes [BR:
smi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BN406_00056 (dapE)
Peptidases and inhibitors [BR:
smi01002
]
Metallo peptidases
Family M20
BN406_00056 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CCM66101
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All DBs
Position
complement(59237..60430)
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AA seq
397 aa
AA seq
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MFPTDPVSNLAALIRCPSVTPAEGGALAALAAMLAPVGFKVDRVVAKEPGTPDIENLYAR
IGGEGPHLMFAGHTDVVPVGDEAAWSRPPFSAAIAEGEMYGRGAVDMKGGIACFVAAVAR
HVEKHGAPKGSISFLITGDEEGPAINGTVKLLEWAAARGERWDACLVGEPTNPDCIGDMI
KIGRRGSLSGRITVHGIQGHAAYPHLADNPVRSILQLAQALMDPPFDDGTENFQPSNLEV
TTIDVGNTAVNVIPAKASAAFNIRFNDRWTAESLMAEIVARLDRAAAGSALRPGRGPARY
EIVWNERPSHVFLTRNNALIDSLSGAVEAVTGRQPQLSTTGGTSDARFIKDYCPVVEFGL
VGKTMHMVDERVALADLETLTGIYETFIARWFGHAAA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaccgatcccgtctccaatctcgctgccctcattcgctgcccctccgtcaca
cccgccgagggaggcgcgctcgcggctcttgcagccatgcttgcaccggtcggcttcaag
gtcgaccgggtcgtggcgaaggaacccggaacgcccgacatcgagaacctttacgcccgg
atcgggggcgaagggccgcatctgatgttcgccggccacaccgatgtggtgccggtcggc
gacgaggcggcctggagccgaccgcccttctccgccgcgatcgccgaaggtgaaatgtac
ggacgcggcgccgtcgacatgaagggcggcatcgcctgtttcgtggcggcggtcgcccgt
cacgtcgagaagcatggcgcgcccaagggctcgatctccttcctcatcaccggcgacgag
gaaggcccggcgatcaacggcacggtgaagctcctcgaatgggcggcggcaaggggcgag
cgctgggacgcctgtctcgtcggcgagccgaccaatcccgactgcatcggcgacatgatc
aagatcggccggcgcgggtcgctctccggccggatcaccgttcatggcatccagggccac
gccgcctatccgcatcttgcggacaatccggtgcgcagcatcctgcagctcgcacaggcc
ctgatggacccgcccttcgacgacggcaccgaaaatttccagccttcgaacctcgaagtc
acgaccatcgatgtcggcaataccgcagtaaacgtcattcccgccaaggcgagcgccgcc
ttcaacatccgtttcaacgaccgctggacggccgaaagcctgatggcggagatcgtcgcg
cgtctcgaccgcgcagcagcaggtagcgcgctgaggcccggccggggtccggccagatac
gagatcgtctggaacgagcgtccgagccacgtcttcctgacgcgcaacaacgcgctcatc
gattcgctttcgggtgccgtggaggccgtcaccgggcggcagccgcagctgtcgaccacc
ggcggtacatcggacgcgcgcttcatcaaggactattgcccggtcgtcgaattcggcctc
gtcggcaagaccatgcacatggtcgacgaacgcgtcgcccttgccgatctcgaaaccctg
accgggatatacgaaaccttcatcgcccgctggttcggtcatgccgctgcttga
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integrated database retrieval system