Sinorhizobium meliloti Rm41: BN406_03527
Help
Entry
BN406_03527 CDS
T02332
Symbol
yagR
Name
(GenBank) Putative xanthine dehydrogenase YagR molybdenum-binding subunit
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
smi
Sinorhizobium meliloti Rm41
Pathway
smi00230
Purine metabolism
smi01100
Metabolic pathways
smi01120
Microbial metabolism in diverse environments
smi01232
Nucleotide metabolism
Module
smi_M00546
Purine degradation, xanthine => urea
smi_M00958
Adenine ribonucleotide degradation, AMP => Urate
smi_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
smi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
BN406_03527 (yagR)
Enzymes [BR:
smi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
BN406_03527 (yagR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
DUF1289
Motif
Other DBs
NCBI-ProteinID:
CCM69809
LinkDB
All DBs
Position
pSYMA:complement(27744..29945)
Genome browser
AA seq
733 aa
AA seq
DB search
MMRFDTPATTNPIDQGKVIGKPITRIDGPLKTTGKAIYAYEWHDPNTRYAYGYIVGSAIA
KGRIRSMDVAAARNAPGVIAVVTSDGVGELKKGKYNTAKLFGGTEIQHYHQAIAVVVAET
FEEARAAAALVKVDYAEEKGAFDLAAAKDSAVEPEGGGDSGAGDFDAAFEAAPVKLDQIY
TTPDQSHAMMEPHASIAAWNGDDLTVWTSSQMIDWWRTDLATTLGIDKDKVHLMSPFIGG
GFGVKLFLRADAVLAALAAREAKRPVKVALPRPFLMNNTTHRPATIQRIRIGAGRDGKIT
AIAHESWSGDLPGGGPEVAVQQTRLLYAGENRMTAMRLATLDLPEGNAMRAPGEAPGMMA
LEIAIDEMAERLGLDPVEFRIINDTQVDPEKPERPFSHRNLVGCLRTGAERFGWRDRSKQ
PGARREGNWLIGMGVAAAFRNNLVLNSGARVRLDREGIVTVETDMTDIGTGSYTIIAQTA
AEMLGVPIEKVAVSLGDSRFPVSSGSGGQFGGNCSTAGVYAACAKLREAVAQKLGFNSAD
DLIFAEGEVRSGDRRMPLAQAAGDEGLVAEDQIEFGDLTKTHQQSTFGAHFVEVAVDVAT
GETRIRRMLAVCAAGRILNPITARSQVIGAMTMGVGGALSEELVVDKERGFFVNHDLAAY
EVPVHADIPHQEVVFLNETDPMSSPMKAKGIAELGICGVAAAVANAIYNATAIRVRQYPI
TLDKLVNELPEIS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgatgagattcgacacaccagcaacgacgaacccgattgatcagggcaaggtaatcggc
aagcccatcacccgcatcgacggtccgctcaagaccaccggcaaagcaatttatgcctat
gagtggcatgatccgaatacccgctatgcctatggctatatcgtcggttcggcaatcgcc
aagggccggatcaggtcgatggatgtcgcggccgcgaggaatgctcccggcgtgatagcg
gtcgtcacctccgatggcgtgggggaactgaagaagggcaaatataacaccgccaagctc
ttcggcggcaccgaaattcagcactaccaccaggcgatcgccgtcgtggtcgccgaaaca
ttcgaggaggcccgcgccgccgccgcgctcgtcaaggtcgattatgccgaggaaaaaggc
gccttcgatctggccgcggcgaaggacagcgctgtcgagccggaaggcggcggagactcc
ggggcgggcgactttgatgccgccttcgaagcagcccccgtcaagttagaccagatctat
accaccccggaccagtcgcatgccatgatggagccgcacgcttccatcgccgcgtggaac
ggcgacgacctgacggtctggacatcgagccagatgatcgactggtggcggactgacctc
gcgacgacgcttgggatcgacaaggacaaggtgcatctcatgtcgccgttcattggtgga
ggcttcggggtgaagctgttcctgcgcgcggatgcggtgttggcggcgcttgccgcgcgt
gaagcaaagcgccccgtaaaggtcgccctcccccgccccttcctgatgaacaacaccaca
catcgcccggcgacgatccagaggatcagaatcggtgcagggcgcgacggcaagatcacg
gcgatcgcgcatgaaagctggtccggggaccttccgggcggtggtcccgaggtggccgtc
cagcagactcgcctgctttatgccggcgagaaccggatgacagccatgcggcttgcgaca
ctcgatcttccagaaggaaacgcgatgcgcgctcccggcgaggcgcccggcatgatggcg
ctggagatcgccatcgacgaaatggccgaaaggttgggtctcgatcccgtcgaattccgg
atcatcaacgacacccaggtcgacccggagaagcccgaacggcccttctcgcaccgcaat
ctcgtcggctgcctgcgcaccggcgcggagcgcttcggctggcgagaccggagcaagcaa
cctggcgctcggcgcgaaggaaactggctgatcggcatgggagtggccgcggccttccgc
aacaatcttgtgctgaactccggcgcccgcgtccggctcgaccgcgagggcatcgtcacc
gtcgagaccgatatgaccgatatcggcacgggcagttacacgatcatcgcccagacggcg
gccgaaatgcttggggtcccgatcgagaaggtcgccgtaagcctgggagattcgcgcttc
cctgtttcctcgggttcgggcgggcagttcggaggaaactgctccaccgccggcgtatac
gcggcctgcgccaagctgcgggaagccgtggcgcagaagctcggtttcaacagcgccgac
gacctgatcttcgcagaaggtgaagtccggtcgggagaccggcgcatgccgctcgcgcaa
gctgccggcgatgaggggctcgtggcggaggaccagatagaatttggtgacctcaccaag
acccatcagcaatccaccttcggcgctcatttcgtcgaggtcgcggtcgatgtcgcaaca
ggagagacacggatccggcgaatgctggcggtctgcgccgccggccggatcctcaatccg
atcaccgcacgcagccaggtgatcggtgcgatgacaatgggcgtcggcggcgccctgtcg
gaggagctcgtcgtcgacaaggagcgcggcttcttcgtcaatcacgatctcgccgcttac
gaggtgccagtgcacgccgacattccgcatcaggaggtcgtcttcctcaacgagaccgac
ccgatgtcctcgccgatgaaggccaagggtatcgccgagctcgggatctgcggtgtcgcg
gcagctgtcgcgaacgctatctacaatgcgaccgccataagggtacggcagtatcccatc
acgctcgacaagctggtcaacgagcttccggaaatcagctaa
DBGET
integrated database retrieval system
