Breviolum minutum: v1.2.028716.t1
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Entry
v1.2.028716.t1 CDS
T04349
Symbol
symbB.v1.2.028716.t1
Name
(OIST) -
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
smin
Breviolum minutum
Pathway
smin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
v1.2.028716.t1 (symbB.v1.2.028716.t1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smin01009
]
v1.2.028716.t1 (symbB.v1.2.028716.t1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smin03021
]
v1.2.028716.t1 (symbB.v1.2.028716.t1)
03019 Messenger RNA biogenesis [BR:
smin03019
]
v1.2.028716.t1 (symbB.v1.2.028716.t1)
03041 Spliceosome [BR:
smin03041
]
v1.2.028716.t1 (symbB.v1.2.028716.t1)
Enzymes [BR:
smin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
v1.2.028716.t1 (symbB.v1.2.028716.t1)
Protein phosphatases and associated proteins [BR:
smin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
v1.2.028716.t1 (symbB.v1.2.028716.t1)
Transcription machinery [BR:
smin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
v1.2.028716.t1 (symbB.v1.2.028716.t1)
Messenger RNA biogenesis [BR:
smin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
v1.2.028716.t1 (symbB.v1.2.028716.t1)
Spliceosome [BR:
smin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
v1.2.028716.t1 (symbB.v1.2.028716.t1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
LinkDB
All DBs
AA seq
265 aa
AA seq
DB search
MRRSRNFSLDILIDQLLQVRSFRPSERKEVFLNEEDLESLIIKAREVFADQPMLLELEAP
MQVVGDVHGQYYDLLRILEYGGSPNDRNYLFLGDYVDRGKNSIECISLLFAYKVKNPENL
FLLRGNHEVASINRTYGFYEECKRRFNVKLWNSFCDCFNWMPVCALIQDRIICMHGGLSP
DLRTFDQIRNIDRPVDPPDAGLLADILWSDPSHSVDDWGDNERGVSFTFGKNVVKSFLKN
HNLDLICRAHQVVEDSELIDLRGPC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
agaccccagggagggggaaaaacccacaaccagtcatcacatctcgcgagtagttgattt
ctcgccttgcaccatggcacagaaattgatgcatgcaggagatgtcaaaatgcgcagaag
caggaattttagcctggatattttgattgaccagttgcttcaagtacggtctttcagacc
tagtgagagaaaggaagtctttttgaatgaggaggatctggaaagcctgataattaaggc
acgagaagtttttgcggaccagccgatgcttttagagctggaagcgcccatgcaggttgt
aggtgatgtgcatggtcagtactatgacttgctgagaatactggagtatggtggatctcc
caatgatagaaattatttgtttctgggagactatgtggacaggggtaaaaactccatcga
gtgcatttccctcctgtttgcctacaaggtgaagaatcccgagaatttgttccttcttcg
agggaaccatgaagttgcctcgatcaacagaacttatggcttctacgaagagtgcaagag
acgctttaatgtcaagctctggaacagcttttgtgattgtttcaattggatgcctgtgtg
tgccctgatccaagatcgcatcatttgcatgcatggtggcttatctcctgacctcagaac
ctttgatcagatacgaaacattgaccgcccggtagacccaccagatgcaggacttttggc
ggacatcctttggtcagacccttcccacagcgtggatgattggggtgacaacgaacgcgg
agtctcatttactttcggtaaaaatgtggtgaaatcctttctgaaaaatcacaacttgga
cctgatttgtcgcgcacatcaggtcgttgaggacagtgaattgattgacttgcgtggacc
ctgctagaaaaatcggccgccaggacggctacgaattcttcgccgcccggaaactggtga
ccgttttttcggcacccaactacatggatcagtttgagaatccaggtgctatggcaaaag
cagaggatgcttcattaccatgtttttgactaggaaattgtttgatgactactgttgatg
gaagaactcctgcaccatcgggggatgtacaaaaccctataaataatgggataaact
DBGET
integrated database retrieval system