Schistosoma mansoni: Smp_001090
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Entry
Smp_001090 CDS
T01095
Name
(RefSeq) putative nuclear pore complex protein
KO
K14301
nuclear pore complex protein Nup107
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_001090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_001090
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_001090
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Smp_001090
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Smp_001090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Imm53
Motif
Other DBs
NCBI-GeneID:
8343763
NCBI-ProteinID:
XP_018649525
LinkDB
All DBs
Position
1:complement(64109298..64141323)
Genome browser
AA seq
966 aa
AA seq
DB search
MFGILRVLMFLRNKLFLDGSSLFPHFCSLWKNSQTALSEIPIQYGNACHKIAHRLPRMFT
KMSHRKGLPNVRNITEMINLERNTWNLISSIYLDRFESESRTGTVEGKDLSNFNHSEREI
IRLLYERDNELREAQILIDWLEQIVREQIEEVAEKYECLFNQTTAWENTAHLLSYLSQAE
LTKHHLVKELHPDAVTLTGNELDQKDQIDNDRFINYLFLCLRGGDLHRAQLLCTQRGEFW
RAISLEGWRPFHYSGFVENESTQIQTIKDTNENSNYSKPLQMKFNIEGNPMRILYKSVCW
WNSENIKLRSFERAIYATLSGNLNVLSQILPTSWTDQTWAHCRALVEARVDSSLRSLLNT
GPRADTLAVTGKTSKYWPLDGGLSLPESAWTPGDWTLSDVFARVDARLGWSAIGCLEKCN
NLRMKSVLRSAMNDFLMDDTSYLYTNDDIGGGGANGNDMESPSVYAIIYCIFYAVQQTIM
LKNYDSFLLTLANVMPKLVCYGLGDGIVPDVTPLQPPNLNKVGNTDQVVCHTLRFLTHFV
LFLKSADSDIPDESYSEIIKAYLCFLIVNKETDLVAYYVSALPNESLQIEWYSWFLSEIN
HPTEREHCLSLAVNYGFNLSKLTRSVVRLSKQRIELSSMNQYSSNTIGHHSILSKQNGYK
QRIIAMDWLFYNPDQRGEALCLANSLLRVLSKLPVGTLEHAKIICEKLDSPDWLVNTIRE
HECLTLYLESRDAFADWYQQVHTNRPVQPSSLTNNNNNLMHTTYGPRGLAQRLAIEESKK
EYLARLERWRHDTRLDTEAAAEKLLALLTYPHPGWLVDIEQQQQQQQQQQLNMDPNDRLT
STTKTNHNHSMNFHHDKLMDHEIEYNEGETHEKHCGTLLVNKEDLFDGLGENSTSRQLQM
NVLRETCITETVFLIVRLYQTAGLHQKCIELSNLIVDNEYGLFKVGRICFGIQAFLSVFK
VVNSYK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtattttgcgagtgctcatgtttttacgcaataaattgtttttagatggatca
agcctcttccctcatttttgtagtctttggaaaaattcccaaacagctttatctgagatc
cctattcagtatggtaatgcatgccataagattgctcatagactacccagaatgtttact
aaaatgtctcatcgtaaaggattgcctaatgttcgtaatattacagaaatgattaatctt
gaaaggaacacatggaatcttatttcaagcatttacttggaccgttttgagtcggaatct
aggaccgggacagttgaaggaaaagatttatctaattttaatcactccgaacgggaaata
attcgattactatacgaaagagataatgaacttcgtgaagctcagatattaattgattgg
ttagaacaaatagttcgtgagcagatcgaagaagttgctgagaaatatgaatgtttgttc
aatcagacaactgcttgggagaatacggcacatttattaagttatctttcacaagcggag
cttactaaacatcatttagtaaaagaattgcatccggatgctgtaactctaacaggcaat
gaattggatcagaaagatcaaattgacaatgatcgatttataaattatttatttctatgt
cttcgtggtggggatcttcatcgtgctcaacttctttgtacacaacgtggtgaattttgg
cgtgctatctcacttgaaggttggcgaccatttcattattccggttttgtggaaaatgaa
tcaactcaaattcaaacaataaaagatacaaatgaaaattctaattattctaaaccatta
caaatgaaattcaatattgaagggaatccaatgagaattttatacaaatctgtatgttgg
tggaattcagagaatataaaattacgttcatttgaacgagctatctatgctacattatca
ggaaatttaaatgttttatcacaaattttaccaacttcatggacagatcaaacatgggca
cattgtcgtgctttagttgaagctcgtgtagattctagtctacgtagtttattgaatact
ggtcctagggctgatacactagctgttaccgggaaaacatctaaatattggcctctggat
ggcggtttaagcttacctgaatcagcttggacaccaggtgattggacattatccgatgta
tttgcacgtgtcgatgcacgtttaggttggtctgctattggatgtttagaaaaatgtaat
aatctacgtatgaaatcagtactacgttctgcaatgaatgatttcttaatggatgatact
tcatatttgtacacgaatgatgatattggtggcggcggtgccaatgggaatgatatggaa
tcaccttctgtatacgctattatatattgcattttctatgctgtacaacagactatcatg
ttgaagaattatgattcttttctcctaactttagccaatgttatgccgaaacttgtatgt
tatggtttaggtgatggtattgttccagatgtaactccattacaaccgccaaatttgaat
aaagttgggaatactgatcaagtagtttgtcatacacttcgatttctgacacattttgtt
ctgtttttaaaatcagcagattctgatattccggatgaatcatattcagaaattattaaa
gcttatttatgctttttaattgtaaataaagaaacagatttagttgcttattatgtttct
gcattacctaatgaatcattacaaattgaatggtattcatggtttttatcagaaattaac
catccaactgaacgtgaacattgtttatcattagctgttaattatggttttaatttatct
aaattaacaaggtcagtagtaagattatcaaaacaacgtattgaattatcctcaatgaat
caatattcttctaatacaattggtcatcattcaatattatctaaacaaaatggttataaa
caacgtattattgcaatggattggttattttataatccagatcaacgtggtgaagcatta
tgtttagctaatagtttattaagagttctatccaaattacccgttggtacattagaacat
gctaaaatcatttgtgagaaattggattcacctgattggcttgtgaatacaattcgtgaa
catgaatgtcttactttatatttagaaagccgggatgcatttgctgactggtatcaacaa
gtacatactaatcgaccagtacaaccgtcttcgttaacaaataataataataatcttatg
catacaacatatggtcctcgtggtttagcacaacgtcttgctattgaagaatcaaaaaaa
gagtatttagcacgtcttgaacgttggcgacatgatacacgtttggatacagaggcagca
gctgaaaaactcttagcattattgacatatcctcatcctggttggctagttgatatagaa
caacaacaacaacaacaacagcagcagcagctgaatatggatccaaatgatcgattaaca
tcgacaacaaaaactaatcataatcacagtatgaattttcatcatgataaactaatggat
catgaaatagaatataatgaaggtgaaacacatgaaaaacattgtggaacattacttgta
aataaagaagatttatttgatggacttggtgaaaattctacttcacgtcaattacaaatg
aatgtactacgagagacatgtattacagagacagtatttcttattgttcgtttatatcaa
actgctggattacatcaaaaatgtattgaattatctaatttaattgtagataatgaatat
ggtttattcaaggtaggtaggatttgttttggaattcaagcgtttttgtctgttttcaag
gttgtgaatagttacaaatga
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