Schistosoma mansoni: Smp_035030
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Entry
Smp_035030 CDS
T01095
Name
(RefSeq) putative atp-dependent RNA helicase
KO
K13184
ATP-dependent RNA helicase A [EC:
3.6.4.13
]
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_035030
Enzymes [BR:
smm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
Smp_035030
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Smp_035030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_19
AAA_22
nSTAND3
ATPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
8344513
NCBI-ProteinID:
XP_018647907
UniProt:
G4V825
LinkDB
All DBs
Position
1:complement(14932035..14944812)
Genome browser
AA seq
1289 aa
AA seq
DB search
MCDPEGIKSFLYTFLQTKKRIAPEYTFIEKPVGRNKVRFLCEARADGFNYVGIGNSTTKK
EAQTNAARDFVNYLVREGEIPASSVPAIQPGNVIYSEPASTSTSENFGQSPQQQGNSLGS
GGSYISSIYDQKKLEEAEEVDLTSDLHGGWSMENAKARLNEYLQATRQQVGQVKYTSVGP
DHSRSYIAEMTVLAKNLRKTLYAREAGSNKQLASRACCLSLVRQLFHAGELEAYTGEKRK
KKHSEVAVHDVNLNSKVEENLTDVLENLGLPVNLKPTNLPLDQAYNMITNYNLVDFGDAP
KQQPQLVAWCPPFPNWNPWTACNIDEGPEATQPLSHISANLADERLRRLDSDPQLRSLMD
ERAQLPVNPYRVSILEAVRRNKVTIIRGETGCGKTTQIPQFILDSYLESGIGAECSILVT
QPRRISAISLAERIAYERGETVGTSVGYCVRFETVYPRPYGSILFCTVGTMARKMEGGLR
GVSHVIVDEIHERDVNTDFMLILLREMVRANRNLRLVLMSATIDITMFSEYFGDCTVLDI
EGRTHPVEYYFLEDCIKMVNFVPPPVDEKKRKRRQELENVTDNAEENCNLKCDPVYGEVV
VRSMGEITEKEVPFELVGALLDKIIGMNIPGAVLIFLPGWNIISLLRKYLQSHSRYGSPN
YVILPLHSQIPREDQRLVFRSTPSGVRKIVLATNIAESSITINDVVFVIDFCLSRTKLFT
ARNNLTSYSTSWSSKTNLEQRRGRAGRVRPGFAFHLCSRARFDRLEQHATPEILRTPLHE
LALLIKLLRLGSVRDFLMKALQPPPLDAVIEAEHTLKEMKALDKNDELTPLGFILARLPI
EPRLGKMLIFACVFNLGGAAAVLTSTASLGCDPFLLPPDHRRLTNQQRSFAAGYSSDHLA
GLNVFQEWTTERARRGDESADLFCDQHGFNSSALRVIDDAANQLRAILINLGFPEESLSD
APVNFNLKHNIDCDILSTLLVSGLYPNICFHSDKRKLLTTEGTLALIHKSSVNCMKDIKF
NYPFFVFDEKIRTQAVSCKGLTMVHPIQLMLFGCRSAIWRSDDSSDIGIVVIDDWIPFRM
NFMTAARIFAFRPALEALLVRTCLRPEAVADLREEDQRVINVLRQLCSPEALKQNVGFDE
ANNFDSPPRKRFATSSNYPLLSGRSHRNKGCENLYSEKQGFGRYTNCPNRSTDSEQVHDI
QCGLWQDPYPQFSNQRYDQVPVNRFSGNYMGGRSFGPNGAGNNFNGSSWNSYGAPNFGGY
PYQQQQFTNDRFMQPNQRPSTRPHWDVRY
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatcctgaggggattaagtcatttctgtacactttcttgcaaactaagaaacgc
atagcaccagagtatactttcattgagaagcctgtcggtcggaataaggttaggtttctt
tgtgaggctcgggctgacggcttcaattacgttggaataggaaattctacaacgaaaaaa
gaagcccaaacaaatgcagctagagactttgttaactaccttgttcgtgaaggcgaaatc
cctgcatcttcagttccagcgatacaacctgggaatgtaatatattcggaacctgcaagc
acatctacatcagaaaacttcgggcaaagtcctcaacaacaagggaattcgttaggttct
ggcggtagctacatcagtagcatatacgaccaaaagaagttggaagaggcagaagaggtg
gacttaacttctgatttgcatggtggttggtctatggaaaacgccaaggcacgtctaaat
gaatacttacaggcaactcgccagcaagtgggccaagtgaaatatacttcggtcggtcca
gatcatagcaggagttacatagcggagatgactgtcttggcgaaaaatcttcggaaaact
ctgtacgctcgagaggcgggatcaaacaaacagctagcatctcgtgcttgctgcctatcg
ctagtccggcagctctttcatgcaggagaattggaagcatatactggcgaaaaacggaaa
aagaagcatagtgaggttgcagtgcatgatgttaatttgaattcaaaagttgaagaaaat
ctaaccgatgtattggagaatttaggtcttcccgttaatttgaaacctacaaatctccca
ctagatcaagcttataatatgattaccaattacaacttggtagactttggtgatgctcct
aaacaacaaccccagctggttgcctggtgtccaccattccccaactggaatccatggact
gcttgtaatatcgatgaaggtccagaggctactcaaccattatctcatattagcgctaac
ttggctgacgagcggttacgtcgacttgatagcgaccctcagttgcggtcattgatggat
gaacgtgctcagttacccgtgaatccttacagggtctcaatactagaagccgttagacgg
aataaagtgacaattattcgtggcgaaaccggatgcggcaaaaccactcagattccgcag
ttcattctggactcgtatttggaatcgggaataggtgctgaatgctctattctggtaaca
caaccacgacgtatatctgctataagccttgccgagcgcatcgcttacgagagaggcgaa
actgtaggaacttctgttggatattgtgttcgttttgagaccgtttatcctcgtccgtac
gggtctatcttgttttgcactgttgggacaatggcacgcaaaatggaaggaggtcttcga
ggagtgtctcatgtcattgttgatgaaatacatgagagagacgttaatacagatttcatg
ctaatactactgcgcgaaatggtaagagcaaacagaaatctccgacttgttcttatgtct
gctaccattgacataactatgttcagcgagtactttggagactgtacggttttggatatc
gagggtcgtacacaccctgttgaatattactttctagaagactgtataaagatggttaat
ttcgtccctccccccgttgatgagaaaaaacggaagcgccgccaagagttagaaaatgtg
acagataacgctgaagaaaactgcaacttgaagtgtgatcctgtttatggggaggtagtg
gttcgttccatgggcgaaataaccgaaaaggaagttccttttgaacttgttggtgcactt
ttggataagatcataggtatgaatattcccggagctgttcttatcttccttcctggttgg
aatatcattagtcttttgcgaaaatatttacagtcacattcaagatatggaagtccaaac
tatgttatcctgccgctacattctcagattcctagggaagaccaacgcctagtttttcgt
tccactccttctggtgttagaaaaattgtgttggcaactaacatagctgaatcatctatc
acaatcaatgatgttgtctttgtgatcgatttttgtttatcacgcacgaagcttttcact
gctcgtaacaatttgacgtcatattctacttcatggtcaagcaaaacaaatctggaacaa
cggcgaggcagagctggtcgagttcgtccaggatttgcttttcatctttgtagtcgtgct
cgctttgatcgtttagaacaacatgctaccccggagattctgcgtactccgttacacgaa
ctggcattactcataaagcttttgcgtcttggttctgttagagactttttaatgaaggct
ttacaaccaccaccactcgacgcagttattgaagcagagcatacattgaaagagatgaag
gcgttggacaaaaacgatgaactaactcctctgggatttattcttgctcgacttccaatc
gagccacgtttggggaaaatgttgatatttgcttgtgtctttaatctgggtggggcagct
gctgttctcacgtctactgcgagtcttggatgtgacccatttttattgcctccggatcat
cggagactcacaaatcagcaacggtcatttgcagctggttattcaagtgatcatctggct
ggtttgaatgtttttcaagagtggacaactgaacgtgcccgtcgaggtgatgagtcagcg
gacttattttgcgatcaacatggtttcaatagctctgcattaagagttattgatgatgct
gcaaaccaacttagagctattctcatcaacttaggtttcccggaagaatcattgtctgat
gcaccagttaatttcaatttgaaacacaatattgattgcgatatacttagtactttactt
gtgtctggattgtatccaaatatctgttttcattcagataaacgcaaattactcacaact
gagggtactttagcacttatacacaaaagttctgtcaattgcatgaaggacatcaagttc
aattatcccttttttgttttcgatgaaaaaattcgtacccaggccgtttcgtgtaaaggt
cttacaatggtacatccaattcagttaatgctttttggctgccgctctgccatctggaga
tctgatgattctagtgatataggaatagttgttattgatgattggattcctttccgtatg
aacttcatgactgctgcccgaattttcgcttttcgtccagcattggaggcattacttgtc
cgaacttgcttacgaccagaagctgttgccgatcttcgagaagaagatcagcgtgttatt
aatgtgttgcgtcaactatgttcgccagaagcattaaaacaaaatgttggttttgatgaa
gcaaataacttcgattctccgccgagaaaaaggttcgctacatccagtaattacccgtta
ctctctggtcggtcgcatcgaaacaaaggatgtgaaaatttatactcagaaaaacaaggt
tttgggcgctatactaattgtcctaatcgttctactgactcagaacaggtgcacgatatt
caatgtggtctttggcaagatccttatccacaattttcaaatcagcgatatgatcaagta
cctgtcaaccgattttctgggaactacatgggtgggagatcatttggtcctaatggtgca
ggaaataattttaatggatcatcatggaattcatatggtgcaccaaattttggtggatat
ccatatcaacaacaacagtttacaaacgaccggtttatgcaacctaatcaaagaccatca
actagacctcattgggatgtccgttactaa
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