Schistosoma mansoni: Smp_085480
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Entry
Smp_085480 CDS
T01095
Name
(RefSeq) sap18, putative
KO
K14324
histone deacetylase complex subunit SAP18
Organism
smm
Schistosoma mansoni
Pathway
smm03013
Nucleocytoplasmic transport
smm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Smp_085480
03015 mRNA surveillance pathway
Smp_085480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smm03019
]
Smp_085480
03036 Chromosome and associated proteins [BR:
smm03036
]
Smp_085480
Messenger RNA biogenesis [BR:
smm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Smp_085480
Chromosome and associated proteins [BR:
smm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
Smp_085480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
8347073
NCBI-ProteinID:
XP_018646970
UniProt:
G4M0F3
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MTVSDDSTVNREKTCPLLLRMFCSTKKHNNVLEYSRGRTPINELQVYTWFDATLRELASL
VKQVNPESRRRGTLFDFALVFPDHRSPVYRMRELGTVCSGSPSDTDRIMLKDVQFTIGDM
IDVAITPPLTDTNAPFIKNDSLILDSGRRLSKQNNPITRNRRSHEKYHEHPPNSNNPDLE
SSKYRRHVNNVNLTSQDKTEKSESGKESRIDKSSDGRYNYKVNARRVVPY
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtcagatgatagcactgtaaatcgcgaaaagacatgtccactgttactaaga
atgttctgcagtacaaagaaacataataacgttttggagtattctaggggtcgtacccca
ataaatgaactccaagtatatacatggtttgatgctactctaagagaacttgcatctctt
gttaaacaagttaacccagaatcccgtagaagaggaacgttgtttgatttcgccttggtt
tttccggatcaccgatcaccagtgtacagaatgcgtgaattgggtacagtttgttctggt
tctccttcggatacagaccgcatcatgttaaaagatgtacaatttacaattggagatatg
attgatgttgctatcacaccacccttaactgatacaaatgctccatttattaaaaacgat
tcattaatactagactctggtcgtcgtttatcaaaacaaaataatcccatcactcgtaat
cgtcgttcacatgaaaaatatcatgaacatcctcctaatagtaataatcctgatttggag
tcttctaaatatcgtcgacatgtaaacaatgttaatttaacttctcaggataaaacagag
aagtctgaatctggtaaagagtcaagaattgataagtcgagtgatggacgttataactat
aaagtaaatgctcgtcgagttgtaccgtactga
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