Schistosoma mansoni: Smp_138960
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Entry
Smp_138960 CDS
T01095
Name
(RefSeq) putative spfh domain protein 1 precursor.
KO
K23341
erlin
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smm04121
]
Smp_138960
Ubiquitin system [BR:
smm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
ERAD complex
Smp_138960
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Band_7
Motif
Other DBs
NCBI-GeneID:
8351466
NCBI-ProteinID:
XP_018653051
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Position
6:complement(5949790..5998853)
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AA seq
660 aa
AA seq
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MDNYHSLLPIFAAVFAAWSILLGMAFHQIDEGHVGVYYRGGALLSQTNGPGYHLMIPIIT
TYKPVQITLQTDEVKNVPCGTSGGVVIYFDRVEVVNYLAPESVHDIVKNYTADYDKTLIY
NKIHHELNQFCSIHTLQEVYIELFDQIDEFLKRTLQADLVLMAPGLYIQAVRVTKPKIPE
AIRRNYEAMEAEKTKLLIAEQHQKLIEREAETERRRAIIEAEKLAEVSAIEWRAKLVAQE
HERKISEVADATQLARSKALTDAEYYRAMKEAEASHLKLTPAYLELAKYQALAQNSKVYF
TGDQGNLIMDLLNQMSSRKSNQISDHPNQRNLVQVYTVLPPGIDSKVTAHLILIVRLFRP
NSSFTGSRRLEFGSNSLNDIYVQVRWWGEPAGEKCAIFYPRLAHKVGHKQATCTKARYRI
TVPLDRFSAYLKDMRELRLDVIDIRHQRIIGRGRLDRVDRLTPTTPIDAILPVINELGEK
LGDLNISLMIEPVIKNDEISISSNDHIIINEQIDSIQSQQNNGVVNEHPVDLDIGSLDQD
NYHSSHNVNLLDNSNNYRLRTTIHGHGRELTNTDKDSFSTHSGNNNDVNFSKREQLLSLA
LEKSKHLREALSCSSIFNHQDYNDNESDDKNNMDGLRASRSYTSDGRFSGGLTPNKLVKR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggataactaccattcattgttaccgatttttgcagcagttttcgcggcatggagtatt
ttactcggaatggccttccatcaaattgatgaaggtcatgttggtgtctattaccgtggt
ggtgctctactttctcagaccaacggacccggttatcatctgatgattcccatcataacc
acatacaaacctgttcagattactttgcaaaccgatgaagtaaagaatgttccttgtggt
acaagtggtggagttgtcatttattttgatcgtgttgaagtggtcaattatttggcgcct
gaaagtgttcatgacattgtcaagaattatactgctgattatgacaaaacactaatatac
aataaaattcatcatgaactaaaccaattttgtagtatacatactctacaagaagtgtac
attgaattatttgatcaaatagatgaatttttaaagcgaacattgcaagcagatctagtt
ttaatggctcctggtctatatattcaagcggtacgagttactaagcctaaaattcctgaa
gcaattagacgcaattatgaagctatggaagctgaaaaaacaaaactactaattgctgaa
caacatcagaagttaattgaacgagaagctgaaactgagcgtcgtcgtgcaataattgag
gctgagaagttggctgaggtttctgcgatagaatggcgagctaaattagttgctcaagag
catgaacgaaaaataagtgaagttgcagatgctacacaactagctcgatctaaagcgctt
acagacgcagaatattatcgtgccatgaaagaggctgaagcgagccatttaaagttaact
ccagcctatttggaattagcaaaataccaagccttggcacaaaactctaaagtttacttt
actggtgaccaaggaaatcttattatggatcttttgaatcaaatgtcttcaagaaaatca
aaccaaatttcagaccaccctaatcaacgtaatcttgtccaagtttatacagttttacct
ccaggaatcgattcaaaagtaacagctcatctcatattaattgtccgcctatttcgccca
aactcgtcattcactggatcaagacgtctggaatttgggagtaattctttgaatgatatt
tatgtacaagttcgatggtggggtgaaccagctggagagaaatgtgccatattttaccct
cgactagcgcataaagttggacataaacaggcaacatgcaccaaagctcgctatagaatt
actgtaccattagatcgatttagtgcttatcttaaagatatgcgtgaactgcgtctggat
gttattgatattcgtcatcaacgtattattggacgtggacgattagatagggttgatcgt
ttgactccaactacaccaattgatgccattttacccgttattaatgaacttggtgaaaaa
ttgggcgacttaaatatatccctaatgatcgaaccagttataaaaaatgatgaaatttca
attagtagcaatgatcatataatcatcaatgaacagattgattcaattcaatcacaacag
aataatggtgttgtcaacgaacatccagttgatttagacattggatcacttgatcaagat
aattatcattcatctcataatgtgaatttacttgataattcaaataactatagattacgt
acaactattcatggtcatggcagggaattaaccaataccgacaaggatagtttttcaact
cattcaggaaataataatgatgttaatttttcaaaaagagaacaattgttatctcttgca
ttagagaaaagtaaacatttacgtgaagcattaagttgttcatcaattttcaatcatcaa
gattataatgataacgaaagtgatgataagaataatatggatggattgagagcatctcga
tcttataccagtgatggacgcttctcgggcggtttaacaccaaataagttagtcaaacgt
tga
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