Schistosoma mansoni: Smp_139980
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Entry
Smp_139980 CDS
T01095
Name
(RefSeq) putative ataxin 2-binding protein (hexaribonucleotide binding protein 1)
KO
K14946
RNA binding protein fox-1
Organism
smm
Schistosoma mansoni
Brite
KEGG Orthology (KO) [BR:
smm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smm03041
]
Smp_139980
Spliceosome [BR:
smm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
Smp_139980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
8348693
NCBI-ProteinID:
XP_018654226
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All DBs
Position
W:complement(15387319..15401366)
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AA seq
760 aa
AA seq
DB search
MFSSTSPINSNLMVPSTVSSSSSDTIISSTTGVPANFSSSTGSSTAQPTGVTYTKDHEDI
QFSNTTSTCLNPVADICTKVINEVEAANILDPTNSHQVASLEAAVAAAAAALVVSSKNST
IISPVSTYVDPVNHTAHLSDLSTKDASSNVHVQDKTEMSYSFTSSSSSITQNHKVPLFSL
CGDLNLPLITSTTITSSASPSVTSSIMNSGTAAALAANLVNVGPKRLHVSNIPFRFREAD
LRQLLGPFGTILDVEIIFNERGSKGFGFVTFATGEEADHARENLNGTVVEGRKIELLHGS
IHFLKSLSNTYWSLVLPATTLRGIRALVPSTSSTAAIAAAAAALRGAAGITCGLPVVSMP
TPSNLASMVVGSGLGGLLQNQACFAATNPTLTNIAAMPAGNTFNANQALLAAAVASASGT
PVNYNPAAAAAFCLAGADPNTAALLASYAAAAFGGIGSPSPGCLGTNNGPVSGTTPSTAI
QNFGSPSQAPGLTNSLAAMAMFPQTGTLLGPNGHTPLVQWFDPSSNMGVELELQHRIQQQ
QQQIQANQRALAAAVAAGFTPVSLPATNTIENLTGSISGNPVGLCGAFSPSQAAAAVAAN
MLRAFSNSTNSFNATNLTSNRSVTSNSNVLVSSASGSQNANAVQIQANGAHTSISASQVS
VSGSNTPGVVQASLSGTNQPAMAAAAAAAAAVASQHFPTQTSVSPTVMSYLPDLNPAAAA
AASMDPYLNRLAAGYAINNAVVTTPAIYRTNSSYQRFSPY
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttcaactagtcctataaatagtaatcttatggtgcccagtaccgtatcgtct
tcatcaagtgatactattatttcttcaactactggtgttccagctaatttcagtagttcc
actggctcatcaactgctcaaccaaccggagttacatatacaaaagaccatgaagacatt
caattttcaaacacaacttctacatgcttgaatcccgttgcagacatttgtaccaaagtt
atcaatgaagttgaagcagccaatatattagatccaactaattcacatcaagttgcctca
ttggaagctgctgtagcagcagcagctgcggccttggtcgtctcatcgaaaaattctaca
ataatatcaccggtttctacgtatgttgatcctgttaaccacacggctcacctatctgac
ttgtcaacaaaagatgctagttctaatgttcatgtacaagataaaacagaaatgagctac
tcatttacttcatcaagctcttctataactcagaatcacaaagttccattattttcctta
tgtggagatttaaacttgccactgattacttcaactacaatcacatctagtgcttcacct
tcggttactagttcaatcatgaattccggaacagcagccgctttagcagctaatctggtc
aatgttgggccgaaacgtcttcatgtgtccaatatcccatttagattcagagaggcagac
cttcgtcagcttttaggaccatttggtacaatattggatgtagaaattattttcaatgaa
cgtggttccaagggttttggtttcgtcacattcgcaacgggggaagaagctgatcatgca
agagaaaatctaaatggcacagtagttgaaggtagaaaaattgagctactgcacgggtcc
atacattttttaaaatctttgagtaatacttattggagtttggttctcccagcaacaacg
cttcgaggtatcagagcgcttgtaccaagtacgtcttcgacagctgcgatagctgcggct
gctgctgcgttgcgtggtgcagcaggtattacgtgtggattaccagtagtttcaatgcca
acacccagcaacctagcatctatggttgtcggttcaggacttggtggactattacaaaat
caagcttgttttgcagccaccaacccaacacttacaaatatagctgctatgcctgctggt
aatacttttaatgcgaaccaagctttattagcagctgcagtggcaagtgcttcaggaaca
ccggtaaattacaatcctgcagctgcagctgcattttgtttagctggagctgacccaaac
accgcagctttacttgctagttatgccgctgcagcgtttggagggattggaagtccaagt
cctggatgccttgggaccaataatgggcccgttagtggaactacaccatcaaccgccatc
caaaattttggatcaccgtctcaagcacccggtttgacaaattctttggctgctatggca
atgttcccccagacgggaactcttttaggaccgaatggtcatacaccactggttcagtgg
tttgatcctagttcaaatatgggtgttgaactagagttacagcatcgtattcaacaacag
cagcaacagattcaagcaaatcaaagggctctagcagcggcggtagctgctgggtttact
cctgtaagtcttcctgccacgaatacgattgaaaacttgacggggtcgatttcagggaat
ccagttggattgtgtggagccttttcaccttctcaagcagctgcagctgtagctgcaaat
atgttgagggctttctcaaattcaacgaattcatttaatgctactaatttaacgtccaac
agatctgtcactagcaactcaaatgtacttgttagttcagcttccggttctcagaatgct
aatgctgtacaaattcaggcaaatggtgctcatacctcaatttctgctagtcaagtctca
gtcagtgggtcaaatacaccaggggtagtccaagcctcactttctggaacaaatcaacct
gcaatggctgctgcagctgcggcagctgcagctgtagcttctcaacattttcccacacaa
acatcagttagtccaacagtgatgtcttatttaccggatttaaatccagcagcggccgca
gcagctagtatggacccttatctaaacagacttgcagcgggctatgcaataaataatgca
gtggtcactacacctgcaatatatcgaactaactcaagctatcaacgtttctctccttat
taa
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