Streptococcus macedonicus: SMA_0434
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Entry
SMA_0434 CDS
T01674
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
smn
Streptococcus macedonicus
Brite
KEGG Orthology (KO) [BR:
smn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smn03019
]
SMA_0434 (cshB)
03009 Ribosome biogenesis [BR:
smn03009
]
SMA_0434 (cshB)
Enzymes [BR:
smn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMA_0434 (cshB)
Messenger RNA biogenesis [BR:
smn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMA_0434 (cshB)
Ribosome biogenesis [BR:
smn03009
]
Prokaryotic type
rRNA helicases
SMA_0434 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
CMS1
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCF01725
LinkDB
All DBs
Position
445307..446650
Genome browser
AA seq
447 aa
AA seq
DB search
MSFNDFNFKPYIREALAELKFTNPTEVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDENSNNVQVVITAPSRELATQIYQATKQIAEKSETEIRVVNYVGGTDKLRQIEKLKS
SQPHIVIGTPGRIYDLVKSGDLEIYKAHTFVVDEADMTLDMGFLDTVDKIAGTLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTTTVIADTIDNWLVSTKGRDKNAQILEITKAL
NPYLAMIFVNTKERADELHSYLVSNGLKVAKIHGDIPPRERKRTMNQIKKLSYEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLNGIAITLYKPSDDSDIRELERM
GIKFVPKMLKNGEFQDTYDRDRRANREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIKWKV
DEKRKRERRAANRAKGRAERKVRKQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaacgattttaattttaagccctacattcgtgaggcgcttgcagagcttaaa
ttcacaaatccgacagaagtgcaacaaaagttaattcccgttgtgcgttctggtcgtgat
ttggttggagaatctaaaactggttcaggaaaaacgcacactttcttgttaccgattttt
gaaaaattagatgaaaacagcaataatgttcaagtggttatcacagcaccaagccgtgag
ttggcaacgcaaatttatcaagcaaccaaacaaattgctgaaaagtctgaaacagaaatt
cgtgtggtaaactacgttggtggtacagataaattacgtcaaattgaaaaattgaaatca
tctcagccacacatcgtcattggtacacctggtcgtatctatgatttggtcaaatcaggt
gatttggaaatttataaagctcatacctttgttgttgatgaagctgatatgacgcttgat
atgggattccttgatacggtggataagattgcagggacattgccaaaagatgttcaaatt
ttggttttctcagcgactattccgcaaaagttgcaacccttcttgaaaaaatatttgaca
aatccagtcatggaaaaaatcaagacaactactgttatcgcagacacaattgataattgg
ttggtttcaactaagggacgtgataaaaatgcgcaaatcttggaaatcactaaagcctta
aatccatatcttgccatgatttttgtaaacacaaaagaacgtgcagatgagttgcatagc
tatcttgtgtcaaatggattgaaagtggcaaaaattcacggcgatattcctccacgtgaa
cgtaaacgcaccatgaaccaaatcaaaaaactgtcatacgaatacattgtggcgacagat
ttggcagcgcgtgggattgatattgaaggagttagtcatgttatcaatgatgctattccg
caagatttatcattctttgtgcaccgtgttggacgtacaggacgtaatggtttaaatggt
attgcgattacgctttacaaaccaagtgatgattctgatattcgtgaacttgaaagaatg
gggattaaatttgtccctaaaatgcttaaaaatggtgaatttcaagatacttacgaccgt
gaccgtcgagctaaccgcgaaaaatcttaccaaaaattagatactgaaatgattggtttg
gttaaaaagaaaaagaaaaaaatcaaaccaggctacaagaaaaaaattaaatggaaagtt
gatgaaaaacgcaaacgtgaacgccgtgccgctaatcgtgccaaaggacgtgctgaacgt
aaagtaagaaaacaaactttctag
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