Selaginella moellendorffii: SELMODRAFT_115079
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Entry
SELMODRAFT_115079 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03030
DNA replication
smo03082
ATP-dependent chromatin remodeling
smo03410
Base excision repair
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELMODRAFT_115079
03410 Base excision repair
SELMODRAFT_115079
03420 Nucleotide excision repair
SELMODRAFT_115079
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_115079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_115079
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_115079
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_115079
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SELMODRAFT_115079
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
SELMODRAFT_115079
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
SELMODRAFT_115079
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
SELMODRAFT_115079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
TAF
Motif
Other DBs
NCBI-GeneID:
9648149
NCBI-ProteinID:
XP_002981738
JGI:
115079
UniProt:
D8SEL0
LinkDB
All DBs
Position
Unknown
AA seq
148 aa
AA seq
DB search
MVVPPESEELPRANIKRIVKAKLAELARSQLGQERDIPVQKEAFQAFAESTRIFIHYLSA
TANDICRETKRQTINADDVLRALDDLEFGEFVEPLRASLEGYKAGRKSMPKKSSTSTSKR
KTSTTKNKDKAQKAFREGDGEDEEETMQ
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgccgccggagagcgaggagctgccgcgcgcgaatatcaagcggattgtcaag
gccaagctcgcggagctcgccaggtcgcagttagggcaggagcgcgacattccggtccag
aaggaggcgtttcaggcgtttgcggagagcaccaggattttcatccattacttgtccgca
actgccaacgatatttgccgggaaaccaagcgccagaccatcaatgccgacgatgtgcta
cgcgcgctggacgatttggagtttggagagtttgtggagccactgcgagcctctttagaa
ggctacaaggcagggagaaaatctatgccaaagaagagcagtacctcaactagcaaaagg
aaaacttccaccaccaagaacaaggacaaagcacaaaaggcttttagagagggcgatgga
gaggacgaagaggaaacaatgcagtag
DBGET
integrated database retrieval system