Selaginella moellendorffii: SELMODRAFT_142751
Help
Entry
SELMODRAFT_142751 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
3.6.4.13
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_142751
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_142751
Enzymes [BR:
smo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
SELMODRAFT_142751
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
SELMODRAFT_142751
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_142751
Pre-60S particles
SELMODRAFT_142751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
CMS1
Motif
Other DBs
NCBI-GeneID:
9659650
NCBI-ProteinID:
XP_002964717
JGI:
142751
UniProt:
D8R1H7
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MGSKRDEEKKRVDAFLSTKKFQALGASQEMIAALSSLEIVRPSEIQALSYKQVMRGNSCI
IADQTGSGKTLAYLAPLVQRLREDEEKGNFSTAKNPRVLVLAPTSELAMQVLSVCRALST
TCPLKSMVATGGFKWKTQVENLASGPDIVVATPGRFLHHLEEETIQLGKLQSVVLDEVDI
LFEEEEFVEAMQRVRKLASKDVQYIHVTATLPTDVHDKIFNKHPDSVPLLGPSLHLTAPG
LNEILVDCSGDDDSEKTPEAAFENKKKELLNLLGEKRVPKTIIFCNKIETCRKVENILNR
YDRSGTKLSVLPYHAALSQEARLQSLQDFLSSQKPEVSTFLVCTDRASRGLDSVGVGRVI
LFDYPRDPSEYIRRVGRTARAGGAGKVFVFVVGKQVSLARKVMARNEKRHPVHAVPGAST
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggatctaaacgagacgaagaaaaaaagcgggtcgatgccttcctcagcacgaaaaag
ttccaggcgcttggtgcttcgcaagagatgatcgccgcactttcttcgctagagattgtt
cggccatcagaaatacaggcgttatcgtataaacaagtcatgaggggcaacagctgcatt
attgcggatcaaactggctctggtaaaactctggcctacttggctcccttggtgcagcgc
ctgagagaggacgaggagaaaggaaacttctcaacagcaaaaaatcctcgcgtgctagtc
cttgctccaacaagcgagcttgcaatgcaggtgctgagtgtgtgcagagccttgtcaaca
acgtgtcctttgaagtccatggtggcaacgggtggattcaagtggaaaacacaggtggag
aatctggctagtgggcctgacattgttgtggcaacgcctgggcggtttcttcatcatttg
gaagaagaaacaattcagctcggtaagctgcaaagtgttgtcctcgatgaagtcgacata
ctattcgaggaggaagagtttgtagaagcgatgcagcgggtgaggaaactggcatcgaag
gacgtccaatacattcacgtgactgctacgttaccaactgatgttcacgataaaattttt
aacaagcacccggactctgttcctcttctaggaccgagtttgcatctcactgctcctggc
ctcaacgagatcctcgtcgattgtagtggagatgatgacagcgaaaagactcccgaagct
gcctttgagaacaaaaagaaagagctcttgaatctactgggagagaagcgtgttccgaag
acaataatattctgcaacaagattgagacgtgcaggaaggtggaaaacatactaaaccgc
tacgatcgatcgggtacaaagctatccgtgctgccttaccatgcagcactgtcgcaagaa
gctcgactgcaaagcctgcaagatttcctgagctcgcaaaagcccgaagtatcaacattc
ctggtgtgcacggacagagcctccagaggcctggactcggttggagtgggacgcgtcatc
ctcttcgactacccccgagatccgagcgagtacatccggcgcgtggggagaaccgcccga
gcaggcggtgctggcaaagtcttcgtgttcgtggtggggaagcaagtcagcctggccaga
aaagtcatggctcgtaacgagaaacggcatcccgtgcacgcagtacctggagcttccacg
taa
DBGET
integrated database retrieval system