KEGG   Selaginella moellendorffii: SELMODRAFT_228648
Entry
SELMODRAFT_228648 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_228648
  09124 Replication and repair
   03420 Nucleotide excision repair
    SELMODRAFT_228648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_228648
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_228648
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     SELMODRAFT_228648
  RNA polymerase III system
   RNA polymerase III
     SELMODRAFT_228648
  RNA polymerase I system
   RNA polymerase I
     SELMODRAFT_228648
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      SELMODRAFT_228648
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 9635869
NCBI-ProteinID: XP_002979667
JGI: 228648
UniProt: D8S8M8
LinkDB
Position
Unknown
AA seq 206 aa
MAQLDDSTNRLYRIRRTIMQMLRDRDYLVADYEVSLTKEQFRDKFGDEPKRDDLVISKAK
RSDQSDQIFVFFPEEPKVGVKTIKTYAERMKSELVFRAIMVVQTSLTPFAKQCLSEMAPK
YQIEVFQEAELLVNIKEHTLVPEHQVLSAEEKKTLLERYTVKESQLPRMQDRDPVARYYG
LKHGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgcagctggatgacagcacgaatcggctctacaggatccggcggacgatcatgcag
atgctgcgcgacagggactacctggtggccgattacgaggtatcgctcaccaaggagcaa
ttcagggacaaatttggggacgagcccaagcgcgacgatcttgtcatcagcaaggccaag
cgctcagaccagtcggaccagatcttcgtcttcttcccggaggagcccaaggtgggggtg
aagacgatcaagacgtacgccgagcgcatgaaatcggagctcgtgtttcgcgcgatcatg
gtcgtccagacgagtctcacgccatttgcaaagcagtgcctgtcggagatggctccaaag
taccagatcgaggtgttccaggaagcggagctactggtgaacatcaaagagcacacttta
gtgcccgagcaccaggttctctctgcggaagagaagaaaactctgctcgagcgttacact
gtcaaggaaagccagcttcctcgtatgcaggatcgcgatccagtggctcgatactacggt
ctcaagcacggccaagtcgtgaagatcatccggccgagtgagactgccggacgatacgtg
acttaccgctacgttgtttga

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