Selaginella moellendorffii: SELMODRAFT_41308
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Entry
SELMODRAFT_41308 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_41308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_41308
Spliceosome [BR:
smo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
SELMODRAFT_41308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
9629726
NCBI-ProteinID:
XP_002992587
JGI:
41308
UniProt:
D8TAH2
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MEKERRDRRHRVEEDDRWHHDEKRERRHHRDVDREEDDHRRRHKSSSSRYDKQEDDRRHH
KSKEERHDRGHKSSKEEKEKTRSEKRGREQDDDLKKRSRDQEDGSKVEKRSRDQEDESRK
DAKRKRDLEKETADKSVSKRSRSEFAEEEKASNVEMNGQTPAQPVVALTPAPTPTPAPFS
SPAPAPVPVPTPVPAPAAAPAAVPQTAPVAPEPSPAPEPEVAPVAGDASAIAKAKARMRQ
LRKELNEKLKKLPLVSEVEQLANENDSANTITPDSVVPSGTVDVVANAANIASYKRAQEC
VARLGFQQPPGSMALHVPGVPSAGPKVVKHPVLRLDKQGREIDEHGVVVDNRKSNISTLK
VNINKQKKDAFQILHPELEEDPINNPHFDADMGMDRTKLVRQRRNSFQFVEEGRWTKKAE
IFRLNNRFGAAKAREIRSKQAALAKAKAEGDINPNLIEVTERIFKDDKQHQDPIPHVEWW
DFAVLPPQTQSYDEVIDGAEVKFKKEKINIYVEHPVPIEPPAEPAPPPPQPLKLTKKEQK
KMRTQRRLAREKERQELIRQGKIEPPKAKVKMSNLMSVLGAEATQDPTRMEHEIRTAAAE
RERAHTDRNLARKLTPAERREKKEKRLFDDQGTLETIVAVFRVSDISHPQTRFKVDINAQ
ENRLTGCAIITDGMTVVIVEGGAKSIKRYTKLMLRRINWSAKEEGSGGNEQGDEEDGNEE
KENKCVQVWQGSVARPAFDRFFFQKFHTAGAARKYLSDAGVGHYWDSALHYKEE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaggagggataggcgccatagggtggaggaggacgatcgctggcaccat
gacgagaagcgcgagcggcgtcaccacagggacgtggatcgggaggaggatgatcatcgc
cggcgccacaaatcttcttcttcgaggtatgacaagcaggaggatgataggcggcatcac
aaatccaaggaggagaggcacgaccgaggtcacaagtcttccaaggaggagaaggagaaa
acgaggtcggagaagcgcggcagggagcaagatgatgatttgaagaagcgtagcagggat
caggaagatggatctaaggtggagaagcggagcagggatcaggaggatgaatcaaggaag
gacgcgaagcgcaagcgcgatttggagaaggagacggccgataagtcggtgagtaagcgg
agtcgtagcgaatttgctgaagaagagaaagcttccaatgtagagatgaatggacaaaca
ccagcacaaccagtggtggccttaactccggctccaactccgacaccggctccattttca
tctccagctccagctcctgttcctgttcctacccctgttccagctccagcagcagctcca
gcggctgttccacagactgcccctgttgctccagaaccgtctccagcaccggaaccagag
gtggcaccagttgctggtgatgcatcggccatagcgaaggccaaggcgagaatgaggcag
cttcgcaaggagctcaacgagaagctgaaaaagttgccactggtaagtgaagtggaacag
ctggcaaacgaaaatgatagcgcgaacactataaccccagattctgtggtgccttccgga
acagtggacgttgttgctaatgccgcaaacatagcgagttacaagcgtgctcaggaatgc
gtagctcgcctcggcttccaacagccgcctggttccatggcacttcacgtaccgggtgtt
ccatcggctgggccaaaagttgtaaagcaccccgttcttcgcttggacaagcaaggaaga
gagattgacgagcacggtgtcgttgtggataaccggaagtcaaacatcagcacactcaag
gtgaacatcaacaaacaaaagaaggatgctttccagattttacatccagaattggaggag
gatccaataaataatcctcattttgatgcggacatgggaatggacagaacaaagcttgta
cgtcaaaggagaaactcctttcagttcgtggaagagggaagatggacgaaaaaggcggaa
atctttcgacttaataatcgttttggggctgctaaagcccgcgagataaggtcgaagcag
gcggcccttgcaaaggccaaagcagaaggggacattaacccaaatcttatagaagttacg
gagaggatattcaaggatgacaaacagcaccaagacccgattcctcatgtggagtggtgg
gatttcgctgttctacctcctcagacacagagttacgacgaggtgatcgacggagctgag
gtgaagttcaagaaagagaagatcaatatctacgttgagcaccccgtaccgatcgaaccc
ccagcagagccagcgcctccaccaccacagccactcaagctaacgaaaaaggagcagaag
aaaatgcggacccagcgtcgtctagccagggaaaaagaaaggcaagagctgatcaggcag
ggaaagatcgaacctccaaaagcaaaggtgaagatgtccaacctcatgagcgtgctggga
gccgaggcaacccaggacccgacgaggatggaacacgagatcaggactgccgcggccgag
agagagcgcgctcacacggacagaaacctcgccaggaagctcactccagccgagagacgc
gagaagaaggaaaagaggctctttgacgaccaggggacgctggaaaccatagtcgcggtg
ttccgggtgagcgacatctcccatccccagactcggtttaaggtggacatcaacgcccag
gagaacaggctcacaggttgcgcgatcatcaccgacggcatgacggtggtgatcgtcgag
ggtggcgcaaagtcgatcaagcgatacaccaagctgatgctccggaggatcaactggtcc
gcgaaagaagaaggcagcggtggaaacgagcaaggggacgaggaggatggaaacgaggag
aaggagaacaagtgcgtccaggtgtggcagggaagcgtagctcggccagcgtttgacagg
ttcttcttccaaaagttccacaccgccggggccgcgaggaagtacttgtccgacgctgga
gttgggcattactgggacagcgcgctgcattacaaggaggagtag
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