Selaginella moellendorffii: SELMODRAFT_440001
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Entry
SELMODRAFT_440001 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
3.6.4.13
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_440001
Enzymes [BR:
smo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
SELMODRAFT_440001
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_440001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
nSTAND3
AAA_19
HA2_N
ATPase
PhoH
TniB
Rad17
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
9632592
NCBI-ProteinID:
XP_002967153
JGI:
440001
UniProt:
D8R8T0
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MKKKRGRSGDGAGAGADSNAIEMPAKRKKNKESVLPSKPDAGRISKSMQRKLKKLQEEKE
KRELREQAFETLEKYKLSDNVQALMSSSSALGKAETMREKLRRGMQLRAAGLDVPPEIPL
FRERIVSKDDSVVEPGPSVTAKTEKVHNKTKRTDFCQSVIQDGGNSQAIKESCANAEGTD
ISLSLAAVASAAASNTRKFVVNVWRSEEVDKSRRELPIIMMEQEVMEAVQENDVVIICGE
TGCGKTTQVPQFLYEAGYGSPLYKDRCGIIGITQPRRIAVLTTAKRVAHELNLQLGKEVG
FQVRHDRKIGEKSSIKFMTDGILLREIQYSVIVLDEAHERSVNTDILVGMLSRVLPLRNR
LYFQNKRSEAVTPLKLIIMSATLRVEDFTANQKMFPLPPPVIHVTARQFPVTVHSSRKTE
LQDYESAAYRKVCAIHRKLPPGGILVFVTGRREVEALCKRLRLSFTPSSKLESSDGKPVA
KREDSALLSGTECGALDMRSVADAVDEEDDDSSDWEEDVDGFTGENDSSSSGVSDVEDTD
KTPGNETSNMDHVRKPGPALVLPLYAMLPAAAQLRVFAAVPEGKRLIVVATNVAETSITI
PGIRYVVDCGRAKERKFDGSSGVSRFEVGWISKASADQRAGRAGRTGPGHCYQLYSKTHY
HHNFPDFAPPEISLVPIEGVVLVLKCMGIDKVMNFPFPTPPEKEALLEAEKCLTALSALD
RTTGLPTSIGKAMALYPINPRHARMVIAALQSARVMGGKSRKSVIAACAVAIAAALSVEN
PFFSLEESFKDEKDVAATTPSGEAMKATKKPERHRFKNTSSDALTIMNALRAYEESSNQA
EFCTASHLNQKIMKEMSKLRGQLSRLVRQQLLEDLLIGSGLEEGWKQLSRKKLSANEEKA
LICALCAGWPDRVARRVTRRDRLDTAKSRKRGIRYQASSLHGQEDGGDEEGEGRSIVYLG
PSSSTFSFASDFVVYKEIVETSRPYMACVSSIDAHALVTEASFFCSFSKPLDDPPPWYDR
EADQVKCWVSVTFGPHNWQLPLHAMELPAGRKTVAVFASALLEGRVLASLAPLRPYLAAD
PAMLLKPEAMAHKRVAELVYKLEEGWKTVVDSRRKLAEAWDDGEFLVEEIAAWIQRKHQG
LLRTLREAVKSELDLRGTV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagcgcgggaggagtggcgatggcgctggggccggcgccgacagcaacgcc
atcgaaatgcctgcaaagcgcaagaaaaacaaggaatctgtgctgccgagcaagcctgac
gcggggaggatcagcaagagcatgcagcggaagctcaagaagctccaggaagagaaggag
aagagagaactgcgagaacaggcattcgagacgttggagaagtacaagctctcggataat
gtccaagcacttatgtcctcgtcgagtgcgctaggcaaggcggagacaatgcgggagaag
cttcgacggggaatgcagctgagggccgctggattggacgttcctcccgagattcctctg
tttcgagagaggattgtttccaaggacgattcagtggttgagccggggccgtccgtcaca
gcaaaaacggagaaagtccacaataagaccaaaagaaccgacttttgccagtccgtaatc
caggacggaggaaatagccaagccatcaaggaaagttgtgccaacgctgaagggactgat
atttccttgtcactcgctgcagtggcatcagcagctgcgagcaacacgcgaaaatttgtt
gtcaacgtctggagatccgaagaggtggacaagagtagacgtgaattgcccattatcatg
atggagcaagaggttatggaggcagtgcaggagaacgacgttgtgattatttgtggagag
actgggtgcggtaaaacaactcaagtacctcagtttttgtacgaagctggttatggctct
ccattgtacaaggatcgctgtggcatcatcgggatcacacagcccaggcgaattgcggtc
ctgacaacagcgaagcgcgtggcacacgagctcaacctccaactaggcaaagaagttgga
tttcaagttaggcatgacaggaaaattggagagaaaagctctatcaagtttatgacggat
ggtattcttctcagagaaatccagtactccgtgattgtgctggacgaagcacacgaaaga
agtgtcaacaccgacattctcgttggaatgctatctagagttctacctctgcgaaatagg
ctgtattttcaaaacaaaaggtccgaggccgtcacccctctgaaactgatcataatgagt
gcaactcttcgggttgaggacttcacggcaaaccaaaagatgtttcctcttccaccgccg
gtgattcacgtaacagcgagacagttccccgtcacggttcattccagtaggaagacggag
cttcaggattacgaaagtgcagcatatcggaaagtctgtgccatccacaggaagctcccg
ccgggcgggatattagtttttgtcactggccggcgtgaagtggaagctctgtgcaagagg
ctgagactgtcgtttacaccttcaagcaagctagagtcttcagatgggaagccagttgct
aaacgagaggattcagcgcttttgtcagggactgaatgtggagctttggacatgagatca
gtggcagacgctgttgatgaagaggatgatgattcttcggactgggaagaagatgttgac
ggatttacaggcgaaaatgatagcagcagcagtggcgtgtcagacgtcgaagacacagat
aaaacgccaggtaatgaaaccagcaacatggatcacgtcagaaaaccgggtccagcgctc
gtccttccgctttatgctatgcttccagctgcggcacagctacgagtttttgctgccgtt
ccagaagggaaaaggctcattgttgtcgccacaaatgtagccgagacatctatcaccata
cctggcatacgttacgtggtcgactgtggtcgtgcaaaagagaggaagttcgatggctcc
agcggagtgtccaggtttgaagtcggctggatcagcaaggcgtcagcggaccaacgtgct
ggaagagctggtcgaactggtccgggacattgttatcagctctattctaagacgcactac
caccacaactttccggacttcgctcctccagagatcagtttggttccaatcgagggggta
gtacttgtgttgaagtgcatgggcatcgacaaggtaatgaactttcctttccccacgcca
cctgagaaggaagcattgttagaggcagaaaaatgtctgacagcattatcagctctggat
cgaacgacgggtttgccgacatcaatcgggaaagcaatggctctatatcccatcaatcct
cggcatgcacggatggtgatagcggcgctacagtctgcccgcgttatgggtggcaagtcc
agaaagtcggtgatagccgcttgtgcagtggcaatcgcagctgcgctaagcgtggagaat
ccgtttttcagtctcgaagagtcattcaaagacgagaaagatgttgctgctacaacgccg
agcggagaagccatgaaagcaacaaagaaacccgagcgtcaccgatttaaaaacacctcg
agcgacgcattgacgatcatgaacgcgctccgggcctacgaagaatcaagcaaccaggcc
gagttttgcacggccagccatctcaatcagaagatcatgaaggagatgtccaagctgagg
ggccagctttcgagactagttcgtcaacagctactcgaggatcttttgattggctccggc
ctggaagaaggctggaagcagctaagccggaagaaactcagcgccaacgaagagaaggcg
ctcatctgtgcactctgcgcggggtggccggacagagttgcgagaagagtaactcgtcgc
gacaggctcgacacggccaagtcacgcaagagaggaattcgttaccaggcctcgtcgctc
cacggacaagaggatggaggagacgaagagggagagggacgcagcatcgtctacctcggc
ccgtcctcctcaacgtttagcttcgcgtcggacttcgtcgtctacaaggagatcgtggag
acttccaggccttacatggcgtgcgtctcgtccatcgacgcacacgctctggtgaccgag
gcaagcttcttctgctccttctccaagccgctcgacgatcctccgccgtggtatgaccga
gaagccgaccaagtcaagtgctgggtgtccgtgactttcggcccccacaactggcagcta
ccattgcacgccatggaactcccggcggggaggaagacggtggcggtgtttgcgtcggcg
ttgctggagggccgagtgctggcgagcttggctcctctgcgaccatatctcgctgccgat
ccggcgatgctgctcaagccggaggcgatggcgcacaagagggtggcggagctggtttac
aagctggaggaaggatggaaaacggtggtggatagcaggagaaagcttgccgaggcctgg
gacgatggggagtttttggtggaagagatcgcggcgtggatccaacgcaagcaccaaggg
ctgctcaggacgctccgagaggctgtcaagtccgagctagatcttcgagggacagtttaa
DBGET
integrated database retrieval system