Selaginella moellendorffii: SELMODRAFT_448879
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Entry
SELMODRAFT_448879 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_448879
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SELMODRAFT_448879
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Helicases
SELMODRAFT_448879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Complex1_LYR
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
9630558
NCBI-ProteinID:
XP_002992751
JGI:
448879
UniProt:
D8TAY1
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSASLTIAGLASLAARRDAQRRRVCRLYRKALHHTLDWVIFREPFYKEASKLRARFDVNK
DVVDVDAIERLIVKGEAEFKKFQHPEPYAVPWSPEGVTYARNPPLPAEIGGGKTGALTRG
PFLRISLVFSPPERAVWIAAPVKGCAWLVRRSDLDQHKVGMPIVALGTAAAAVPSFGELG
VREELVDACTKLGWKAPTPIQVEALPLALQGRDLIGLAQTGSGKTAAFALPILQALFQQC
HPFFACVLSPTRELAIQISEQFEALGSQIGVRSVAIVGGVSMVDQAVALGKNPHIVVATP
GRLLDHLTNTKGFSLRNVKYLVLDEADKILHNDFEKEVDEILKVVPRERKTFLFSATMTN
KVAKLQRACLRNPTKVEVSSKYTTALTLKQEYVFVPAKHKDCYFVFLLNEMAGSTAMVFT
RTCDSTRRLALILRSLGFGAIPISGQMSQSKRSGALLKFKAGDRNLLICTDVASRGLDIP
SVDVDYIHRVGRTARAGRSGRAISIVTQYDVDLYKRIEDLIGMTLPEFPAKADEVLLLEE
RVSEAQRLAAMHIREKDASKKSKKRRNGDDDEADDVLALGRQGGHKPLAAQVDLSGLLTE
GAGEAQAVDAAVTERRLWEVEHGSQLAPVPARVCASAQARLEEEPEQTGSHARSLAPVEN
LHVPSQRHTGAQTAQDTSGDVRQAIAQTRLPPLLVAAAGHKPRLRVSLIGSRIGLVATGS
HRRSPNSINPSLN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctctttaacgatcgctggtttggcatcacttgcggcccggcgagatgcccag
aggagacgggtgtgtcggctctacaggaaggcgctccaccatacccttgattgggtcata
ttccgggagcccttctacaaggaggcatctaagctgagagccagattcgatgtcaacaag
gatgtggtagatgtggatgcaatagagaggctcattgtcaagggagaggccgagttcaag
aagttccagcatccagagccatacgcagttccttggtcccctgaaggcgtaacgtatgca
agaaacccacctctcccagccgagattgggggagggaagactggagcactcactagaggg
ccttttttgagaataagtttagtcttctctccaccggaacgagcagtttggattgcagca
cctgtaaaaggctgtgcttggctcgtccgccgatctgatctggaccagcataaagtaggc
atgcccatagttgcacttggcacagcggcggcggcggtgcccagctttggggagctggga
gtgcgcgaggagcttgtagacgcctgcaccaagctcggatggaaggcacccacgcccatc
caggtggaggcgctcccgctggctctgcaaggccgggacttgatcggcctcgcgcagact
ggatccgggaagacagcggctttcgcgctgcctatacttcaagcgctgttccagcaatgc
cacccattctttgcgtgcgtcctgtctcccaccagggagctggccatccagatatcggag
cagtttgaagcgctaggatcacaaatcggcgtcaggagcgtggctattgttggaggcgtc
tctatggtggatcaggctgttgcgctgggcaagaacccgcatattgtggtagccacacct
ggaaggctgctggatcacctcacaaacacaaaaggctttagcttgcgaaacgtcaagtac
ctggtgcttgatgaagcggacaagatcctgcacaacgatttcgagaaggaggtcgatgag
atcctcaaggttgtccctcgggagaggaagacgttcctcttctctgctacaatgacaaac
aaggtggcaaaacttcaacgagcctgtcttcgaaatccgacaaaggtggaagtctcctcc
aaatacactaccgctcttaccctgaaacaagagtatgtctttgttcctgccaagcacaag
gactgttactttgtattcctgctaaacgagatggcggggagtacggcaatggttttcaca
agaacctgtgacagcacgaggcggctggcattgattctccgtagccttggattcggtgct
atccccatcagcggccagatgagccagtccaagcgctcgggtgccttgttgaagttcaaa
gctggcgacagaaacctgctcatatgtactgacgtcgccagtcgtggcctcgacatccca
tctgtggatgtggattacatacatcgcgtaggaagaacggcccgagctgggaggtccggg
cgtgcaatatccattgtcacccagtacgacgtggacctgtacaagaggatagaggacttg
attggcatgactctccccgagtttccagcaaaggcggacgaggtcttgttactcgaggag
cgcgtcagtgaggcgcagagactagctgcaatgcacatccgagagaaggacgcgtccaag
aaatccaagaagcggcggaacggcgacgacgatgaggcagacgatgtactggcgctgggg
aggcagggtggccacaagcctcttgctgcgcaagtcgatctctcgggcctcttgacagaa
ggcgcaggggaagcacaggcagtggacgcagcagtcacagagaggagactctgggaggtg
gaacacggatcgcagcttgcgcctgtaccagcacgagtatgcgcatccgcacaggcacga
ctggaggaggaaccagagcagacaggcagccacgcacgaagtctggcccccgtcgagaat
ctccacgttccttcccagcgccacacaggggcacaaacagcccaagacacaagtggggat
gtccgtcaagcaatcgcacaaacccgactgccacccctcctcgtcgccgccgccggacac
aaaccccgcctccgcgtatcgttgataggcagccgcataggcctcgtcgccactggaagc
catcgccgatcgccaaatagtatcaaccctagcttaaattaa
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