Streptococcus mutans GS-5 (serotype c): SMUGS5_00525
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Entry
SMUGS5_00525 CDS
T02185
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Pathway
smut03030
DNA replication
smut03430
Mismatch repair
smut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMUGS5_00525 (polC)
03430 Mismatch repair
SMUGS5_00525 (polC)
03440 Homologous recombination
SMUGS5_00525 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smut03032
]
SMUGS5_00525 (polC)
03400 DNA repair and recombination proteins [BR:
smut03400
]
SMUGS5_00525 (polC)
Enzymes [BR:
smut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMUGS5_00525 (polC)
DNA replication proteins [BR:
smut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMUGS5_00525 (polC)
DNA repair and recombination proteins [BR:
smut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMUGS5_00525 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
Rv2179c-like
DEDDh_C
Ofd1_CTDD
Motif
Other DBs
NCBI-ProteinID:
AFM80641
LinkDB
All DBs
Position
120244..124644
Genome browser
AA seq
1466 aa
AA seq
DB search
MSELFKKLMDQIEMPLEMKNSRVFSSADIVEVKVYPESRIWDFRFSFETILPIDFYQELR
SRLVTSFETADIKAVFDIEVENAEFSNELLQAYYQEAFKQPTCNSASFKSSFSHLTVSYT
DGKVLISAPQFVNNDHFRKNHLPNLEKQFEAFGFGKLSFDIVSNQKMTEEIKHHFESSRQ
QQIQKASQETLEIQKSLEASMPPPEETFKPVSNFKERIKDRQAAFEKAEITPMAEIETEE
NRITFEGLVFDVERKTTRTGRHIINFKMTDYTSSFPMQKWAKDDEELKKYDMISKGAWLR
VRGNIENNPFTKALTMNVQNVKTIVHKERKDLMPQGEKRVEFHAHTNMSTMDALPTVEQL
VAKAAQFGHPAVAITDHGNVQSFPHGYHAGKKNGIKVLFGLEANLVEDRVPIVYNEVDMD
MNEATYVVFDVETTGLSAINNDLIQIAASKMHKGNIVEQFDEFIDPGHPLSQFTTDLTGI
TDQHVKGAKPILQVLQEFQSFCQDTVLVAHNATFDVGFMNANYERHDLPKITQPVIDTLE
FARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEAKEKHGVNNLLD
LNTKIVDDNSYKKARVKHATIYVLNQKGLKNLFKLVSLSNVTYFAGVARIPRTILDQYRD
GLLLGTACSDGEVFDTVLSKGVEDAVEVAKYYDFIEVMPPALYEPLLARELIKDEAGIQQ
IIKDLIEVGRRLDKPVLATGDVHYLEPEDEIYREIIVRSLGQGAMINRSIGRGENAQPAP
LPKAHFRTTNEMLDEFAFLGEDLARDIVIKNPNEMVERFEDVEVVKTDLYTPFIENSEEK
VAEMTYEKAFEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYICPNPDCKHSEFITDGSVGSGYDLPDKVCSECGTP
YKKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEEYAFRAGTVGTVAD
RTAYGFVKGYERDYGKFYRDAEVDRLAQGSAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQ
YPADDLTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPKTIPADDPEVM
KLFSGTEVLGVTEEEIGTPTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDV
WLGNAQDLIKQGIATLSTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGAWLKISEEER
NGYISAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHHPIYYYCAYFSI
RAKAFELKTMSAGLDAVKARMADISQKRKINQASNVEIDLFTTLEIVNEMLERGFKFGQL
DLYRSEAVEFIIDGDTLIPPFVALEGLGENVAKQIVKARNEGEFLSKTELRKRGGLSSTL
VEKMSDMGILGSMPEDNQLSLFDDFF
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattgtttaaaaaattgatggatcagattgagatgccgcttgaaatgaagaat
tcaagggttttttcatctgctgatattgtggaagtgaaggtttatcctgaaagtcggatt
tgggatttccgtttttcttttgagaccatcttaccaattgatttttatcaggagttaaga
agcagattagtgacgagttttgaaacagctgatattaaggctgtttttgacattgaagtg
gagaatgctgaattttctaacgagcttttgcaggcttattatcaggaggcttttaagcag
ccgacttgcaatagtgctagttttaaaagctctttttcgcacttaactgtttcctatact
gatgggaaagttcttatttcagcgccgcaatttgtcaataatgatcattttcgaaagaat
catttacctaatcttgaaaagcagtttgaagcgtttgggtttgggaaattaagttttgac
attgtatctaatcaaaaaatgacagaggaaataaaacatcattttgaatcctctcgtcag
cagcaaattcaaaaggctagtcaagaaacgctagaaattcaaaaatcattagaagcttca
atgccgccgcctgaagaaacgtttaaacccgtatctaatttcaaagagcgaatcaaggat
cggcaagcagcttttgaaaaggctgagattacgcctatggctgaaattgaaactgaggaa
aaccgcatcacatttgaagggcttgtttttgatgtggaacgcaagacaacaagaaccgga
cgtcatatcatcaattttaaaatgacggattatacctccagttttccgatgcaaaagtgg
gctaaggatgatgaagaattaaagaaatatgacatgatttctaagggtgcttggttgcgt
gtgcgtggcaatatcgagaataatccttttacaaaagccctaaccatgaatgtccaaaat
gtcaagaccattgttcataaagagcgtaaggacttaatgccccaaggggaaaaacgtgtt
gaatttcacgctcataccaatatgtcaaccatggatgctttgccaacagttgagcaatta
gtggccaaggcggctcagtttggtcatcctgcggttgctattacggatcatggcaatgtt
cagagtttccctcatggctatcatgcaggtaaaaagaatggcattaaggttctctttggc
ttggaggctaatcttgttgaggaccgtgtacctattgtctacaatgaagttgacatggat
atgaatgaagcgacctatgttgtttttgacgtggaaactacaggactttcagccatcaat
aatgatttgattcagattgcagcttctaagatgcataaaggaaatattgttgagcaattt
gatgagtttattgatcccgggcatccgctcagtcagtttacaaccgatttaacagggatc
acagatcagcatgtgaaaggggctaaacccattttacaagtattgcaggaatttcagtcc
ttttgtcaagatacagttttagttgcccataacgccacttttgacgttggctttatgaat
gccaattatgaaaggcatgacctgccaaagattacgcagccagtcattgataccttggaa
tttgcacgaaatctttatccagaatacaaacgtcatggtttaggtcctttgactaaacgc
tttcaagtatcgcttgagcaccaccacatggctaattacgacgctgaggcaactggtcgt
ctgctctttatatttcttaaagaggcgaaagaaaagcatggggtcaacaatcttttagat
cttaatactaaaattgttgatgataattcttacaagaaagctcgagtaaagcatgcaacc
atttatgtcctgaatcaaaaagggttgaaaaatttatttaaattagtcagtctatccaat
gttacttattttgcaggtgtggctagaataccaagaacgattcttgatcagtatcgtgat
ggcctcttactggggacagcttgctctgatggtgaagtttttgatacggttctctcaaag
ggggttgaagatgctgtggaggtagccaagtattatgattttattgaagtcatgccacct
gctctttatgaacctcttcttgctcgtgaattaatcaaagatgaagcaggaattcagcaa
attattaaagatcttattgaagttggtcgtcgtttagataagcctgtcttggcaactggt
gatgtccattatctggaaccggaagacgaaatttatcgtgaaatcattgttagaagtctg
ggacagggagctatgattaatcgttctattgggcgtggtgaaaatgctcagccagctcct
ctgcccaaggctcattttagaacaaccaatgagatgttggatgaatttgcttttttaggt
gaagatttagcccgtgacattgtcattaaaaatccaaatgagatggttgagcgttttgaa
gatgttgaagttgttaaaacagacctctatacaccttttattgagaattctgaagaaaaa
gtcgctgagatgacttatgaaaaggcctttgaaatttatggcaatcctcttccggatatc
attgacttgcgtattgaaaaagagttgacttccattttggggaatggatttgcggtgatt
tatctggcttcacagatgctggtaaatcgttctaatgaacgtggttatctggttggttct
agaggttcggttggttctagttttgtggcaaccatgattggtattacagaagtgaatcct
atgccgccacactatatttgtcccaatccagactgtaaacattctgaatttatcacggat
ggttctgtgggttcaggctatgatttgcctgataaagtctgttcggaatgcggcactccg
tacaagaaagatggtcaggatattccttttgagaccttccttggttttgacggagacaaa
gttcctgatattgacttgaacttttcaggtgatgatcagccgagtgctcacttagatgtt
cgtgatatttttggtgaagaatacgcctttcgtgcaggaacagttggtacggttgcagat
agaacggcttatggctttgtcaaaggctacgaaagagattatggcaagttttaccgcgat
gcagaagttgataggctggcgcagggttcagccggtgtcaaacgaacaactggacagcac
cccggtgggatcgttgttattccaaactatatggatgtttatgattttacacctgttcag
tatcctgcggatgatttaacagccgaatggcaaacaacccactttaacttccatgatatt
gatgaaaatgttcttaaacttgatgtgcttggtcatgatgatcccaccatgattcgcaag
ctgcaggatttgtctggtattgatccaaaaacaattcctgctgacgatccagaagttatg
aaactgttttcaggaacagaagtcttgggagttactgaggaagagattggaacaccgact
ggaatgttaggaattcctgaatttggaaccaactttgttcgtggaatggtggatgagacc
catccaacgacatttgcggagcttttacaattatcaggactttcacatggtacagatgtg
tggttgggcaatgcacaggatctcatcaaacaaggcattgcaacgctgtcaacggttatt
ggttgtcgtgatgatattatggtttatcttatgcacgctggtttagaacctaagatggcc
tttactattatggagcgtgtacgtaaaggggcttggctgaagatttcggaggaagagcga
aacgggtatatctcagccatgcgtgagaataatgtgccggattggtatattgaatcctgc
ggaaaaattaaatacatgtttcctaaagcccatgcggcggcttatgtcttgatggctctt
cgtgttgcttattttaaggtgcatcacccaatttattattactgtgcttatttctctatt
cgtgccaaggcttttgaattaaagacaatgagtgctggtttggatgctgttaaggcacgc
atggctgatattagtcaaaagagaaaaatcaaccaagcttcaaatgttgagattgatctt
tttacaaccttagaaattgtcaatgaaatgttggagagaggtttcaaatttggacagctg
gacttataccgcagtgaagccgttgaatttatcattgatggcgatacattgatacctcct
tttgtggctttggaaggtttgggcgaaaatgttgccaaacaaatcgtaaaagcacgtaat
gaaggagagtttctttctaagacagaactgcgtaaacgcggcggtttgtcatcaactttg
gttgaaaagatgagcgatatgggaattttaggcagtatgcctgaagataatcaattgtca
ctttttgatgatttcttttaa
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integrated database retrieval system
