Serratia marcescens WW4: SMWW4_v1c02700
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Entry
SMWW4_v1c02700 CDS
T02448
Symbol
birA
Name
(GenBank) bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/DNA-binding transcriptional repressor
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
smw
Serratia marcescens WW4
Pathway
smw00780
Biotin metabolism
smw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
SMWW4_v1c02700 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smw03000
]
SMWW4_v1c02700 (birA)
Enzymes [BR:
smw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
SMWW4_v1c02700 (birA)
Transcription factors [BR:
smw03000
]
Prokaryotic type
Helix-turn-helix
Other families
SMWW4_v1c02700 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
BPL_LplA_LipB_2
DUF366
Motif
Other DBs
NCBI-ProteinID:
AGE16077
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All DBs
Position
300456..301418
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AA seq
320 aa
AA seq
DB search
MKDTKVPLKLIALLADGEFHSGEHLGESLGMSRAAINKHIQTIREWGLDVFTVPGKGYSL
PGAIQLLEAKRILSLLEDKRVSVLPVVDSTNQYLLDRIDELHSGDACVAEYQQAGRGRRG
RQWISPFGANLYLSMFWRLEQGPAAAMGLSLVIGMVMAEVLQRLGAADVRVKWPNDLYLN
DRKLAGILVELTGKTGDAAQLVIGAGINLAMRDTNASAITQGWINLQEAGIQIDRNELAA
TLLNELRQSLKQFEIDGLAPFIGRWRTLDNFIDRPVKLLIGERQIVGIARGIDSQGALLL
EQDGEIKPFIGGEISLRSAE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataccaaggttccgttaaaactgatcgcgctgctggctgacggcgaattccat
tccggtgaacacctcggtgagtcactgggcatgagtcgcgcggcgatcaataagcatatt
cagaccattcgcgaatggggactggatgtctttaccgtgcccggaaaaggctatagcctg
cctggcgccatccagctgttggaagccaagcgaatcctcagcctgctggaagacaagcgt
gtaagcgtgttgccggtggtcgattccaccaaccaatacttgctggaccgcatcgacgaa
ttgcactctggtgatgcctgcgtcgctgaataccaacaggctggacgagggcgccgcggg
cggcagtggatctcgccattcggtgccaatttatatctgtcgatgttctggcgactggag
caggggccggcagcggctatggggcttagcctggtgatcgggatggtgatggcggaggtc
ttgcagcgcctcggtgcggctgatgtgcgcgtgaagtggcctaacgatctttatctgaac
gatcgtaaattagcggggatcctggtcgaactgacgggaaaaaccggcgatgcggctcaa
ctggtcatcggcgccggcatcaacctggcgatgcgtgataccaatgccagcgccattact
cagggatggattaacctacaggaagcgggaattcagatcgatcgcaatgaactggctgca
accttgcttaatgaactgcgtcagtcattgaaacagtttgagatagacggactcgcgccc
tttatcggtcgctggcgtaccctggataactttatcgacaggccggtcaagctgctgatt
ggcgagcggcagattgtgggtatcgcccgaggaatcgattcacagggcgcactgctgctg
gaacaggacggggagatcaagcccttcatcggtggcgagatatcgctgcgcagcgcggaa
tag
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integrated database retrieval system
