Sinorhizobium meliloti SM11: SM11_chr2888
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Entry
SM11_chr2888 CDS
T01885
Symbol
rluD
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
smx
Sinorhizobium meliloti SM11
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smx03009
]
SM11_chr2888 (rluD)
Enzymes [BR:
smx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SM11_chr2888 (rluD)
Ribosome biogenesis [BR:
smx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SM11_chr2888 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEH80133
UniProt:
F7X7Q8
LinkDB
All DBs
Position
2857874..2858905
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AA seq
343 aa
AA seq
DB search
MNDPFKQASGNRKVLTAGDDAAGRLDAFLTEALAGEFSRNRIKSLIEQGAVSINGATVTE
PKRKVHPGDSFRIALPEPEDPEPKGEAIPLDVLYEDADLIVLVKPAGLVVHPGAGNWTGT
LVNALIHHCGDSLSGIGGVKRPGIVHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGP
LERAYRAVVWGRPRQLKGKIDAPLGRAGDRTKRAVKREDSDDAREAITHYEVVERYHEKP
DGTSLASTVECHLETGRTHQIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRF
PRQALHAFMLQFEHPATGETMHFETPVPADMQELIAALRAGAP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatccctttaaacaagcgtccggcaataggaaagtcctgacggcaggcgatgac
gcggccgggcgcctcgacgccttcctgacggaagcgcttgcgggcgagttttcgcgcaat
cgcatcaagagcctgatcgagcaaggagccgtctcgatcaacggcgcgaccgtcaccgaa
ccgaagcgaaaggttcatcccggcgactccttccggattgcactgcccgagccggaggat
cccgaacccaagggtgaggcgatcccgctcgacgtgctttacgaggatgccgacctgatc
gtactggtcaagccggccggtctggtcgtgcatccgggcgccggcaattggacgggaacc
ctcgtcaacgcgctcatccaccattgcggcgacagcctttccggcatcggcggcgtcaag
cgccccggtatcgtgcatcgcctcgacaaggacacgagcggcgtcatggtggtcgcgaag
aacgatgccgcacaccgccacctttcggatcagttcgccgaccatggccgcaacgggccg
ctcgagcgcgcctatcgcgccgtagtctggggccggccgcgccaattgaagggcaagatc
gacgcaccgctggggcgggcgggcgaccggacgaaacgggccgtcaaacgcgaagacagc
gacgatgcacgcgaggcgatcacgcattacgaggtggtcgagcgctatcacgagaaaccg
gacggcacctctctcgcctccaccgtcgagtgccatctggagaccgggcgtacgcaccag
atccgcgtgcacatggcccatatcggtcatccgctcatcggcgatccggattacggcgcg
gccttccgcaccaaggccaatctgctgccggaaccggcgagggccgccgtcaatcgcttt
ccgcgacaggccctgcacgccttcatgctgcaattcgaacaccccgcaaccggcgagacc
atgcatttcgaaacgcccgtgccggcggatatgcaggaattgatcgcggcgctgcgggcc
ggagccccttga
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