Stenotrophomonas maltophilia D457: SMD_0066
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Entry
SMD_0066 CDS
T02061
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smz
Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smz03032
]
SMD_0066
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_0066
Enzymes [BR:
smz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SMD_0066
DNA replication proteins [BR:
smz03032
]
Prokaryotic type
DNA Topoisomerases
SMD_0066
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMD_0066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CCH10668
LinkDB
All DBs
Position
85940..86998
Genome browser
AA seq
352 aa
AA seq
DB search
MPTPSTPERQAARAAGLRYVDDTQPGISRRRAGKGFSYRDADGHAVRDAATLQRIRALAI
PPAYTAVWICAHANGHLQATGRDARGRKQYRYHADWAAVRDAGKFDRVIAFGEALPALRR
RLSRDLKHSGFPREKVLAVVVALLADTLVRVGNESYAKENRSFGLTTLRNRHLDLLRGGR
VRMRFRGKSGQLHEVTVGDRRLGTLVRGVQQLPGQALFQYRDDDGAIQPVDSGAVNDYLR
EVMGEEFTAKDFRTWGGTLAAVQAFAATELPEPASQRALAKVQREVVCKVATQLGNTPAV
CRKAYIDPCVFAGWERGELAELAGLRGPRQWEQATLRVLRRARRLSRRRQPQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccctctacccccgaacgacaggccgcgcgcgctgcgggcctgcgctatgtc
gatgacacccagccgggcatcagccggcgccgcgccggcaagggcttcagctaccgcgat
gccgatggccacgcggtgcgcgatgccgccaccctgcagcgcatccgcgcgctggcgatt
ccaccggcctataccgccgtatggatctgcgcccacgccaatggccatctgcaggccacc
ggccgcgatgcccgcgggcgcaagcagtaccgctaccacgccgattgggccgcagtgcgc
gacgccggcaagttcgaccgggtgatcgcctttggtgaagcactgcccgcgctgcggcgc
cggctcagccgcgatctcaagcacagcggcttcccccgcgaaaaggtgctggcggtcgtg
gtcgcgctgctggccgacaccctggtgcgggtaggcaatgagtcctatgccaaggaaaac
agatcctttggcctgaccacgctgcgcaaccggcacctcgacctgctgcgcggcgggcgc
gtacggatgcgcttccgcggcaaatccgggcagctgcacgaagtgacggtaggtgaccgc
cggctgggcacgctggtacgcggcgtgcagcagttgccgggccaggcgttgttccagtat
cgcgacgacgacggtgccatccagccggtcgactccggtgcggtcaacgattacctgcgc
gaggtgatgggcgaggaattcaccgccaaggatttccgcacctggggcggcaccctggcc
gcggtgcaagcgttcgcggccaccgagttgcccgaaccggccagccagcgtgcgctggcc
aaggtacagcgtgaggtggtgtgcaaggtggcgacccagttgggcaatacccctgcggtg
tgccgcaaggcctacatcgacccctgcgtgttcgccggctgggagcgcggcgaactggcg
gaactggccggcctgcgtgggccgcgccagtgggaacaggccaccctgcgcgtgctgcgc
agggcgcgccggctcagccgcagacgtcagccgcaatag
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