Stenotrophomonas maltophilia D457: SMD_3783
Help
Entry
SMD_3783 CDS
T02061
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smz
Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smz03032
]
SMD_3783 (topA)
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_3783 (topA)
Enzymes [BR:
smz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SMD_3783 (topA)
DNA replication proteins [BR:
smz03032
]
Prokaryotic type
DNA Topoisomerases
SMD_3783 (topA)
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SMD_3783 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCH14295
LinkDB
All DBs
Position
4250666..4253158
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDYTVLASYGHVRDLIPKEGAVDPDNGFAMHYDVIDKN
EKHVDAIAKAAKGADDILLATDPDREGEAISWHIAEILKERGLVKDKPMQRVVFTEITPR
AIKEAISQPRAIASDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAAECAHPSQHFNAKLVKLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGSLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPSQVARFLTDDERRLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERIQAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEEWIPLMARFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEEKPKFASLRPGQSMHTISLEDALELFLMPRALGEDNGE
PVSVGIGRFGPFAKRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFEGSDI
QVLNGRFGPYISDGRMNGKIPKDREPASLTLAEVQQLMEETGKPVRKGFGAKKAAAKKAP
AKKAAVKKEAAPKKAAAKKAPAKKAAKKAVVKKAAAKKAPAKKAVKKAAK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgccggccaaggccaagacgatcaacaaatac
ctcggcaaggactacaccgtcctggcctcgtatgggcatgtgcgtgacctgattccgaag
gaaggcgcggtcgacccggacaacgggttcgccatgcactacgacgtgatcgacaagaac
gaaaaacatgtcgacgcgatcgccaaggccgccaagggcgccgacgacatcctgctggcg
accgacccggatcgcgaaggtgaagcgatcagctggcatatcgccgagatcctgaaggaa
cgcgggctggtcaaggacaagccgatgcagcgcgtggtgttcaccgagatcaccccgcgc
gccatcaaggaagcgatcagccagccacgcgcgatcgccagcgacctggtcgatgcccag
caggcgcgccgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtccagcgcggcctgtccgccggccgcgtgcagagcccggcgctgcgcatgatcgtc
gagcgcgaggaagagatcgaagccttcatcgcccgcgagtactggtcgatcgccgccgag
tgcgcacacccgtcgcagcacttcaacgccaagctggtcaagctggacgggcagaaattc
gagcagttcaccatcaccgacggcgacaccgccgaagccgcccgcctgcgcatccagcag
gccgcgcagggctcgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggtttcacc
acccgcaagaccatgcaggtggcgcagaagctgtatgaaggcgtggcgatcggtgacgaa
ggcaccgtcggcctcatctcgtacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgaaatccgcgacgtgattgcccgtgattacggcatcgcctcgctgcccgaccag
ccgaacacctaccagaccaagtccaagaacgcccaggaagcgcacgaggcggtgcgcccg
acctcggccctgcgcactccgtcgcaggtcgcccgcttcctgaccgacgacgagcgccgc
ctgtacgaactgatctggaagcgcgccgtcgcctgccagatgattccggccacgctcaac
acggtcagcgtcgacctgtcggctggcagcgagcacgtgttccgtgccagcggtaccacc
gtggtggtgcccggcttcctggccgtgtacgaggaaggcaaggacaacaagagcgccgaa
gacgaggacgaaggccgcaagctgccggcgatgaaaccgggcgaccgcgtgccgctggaa
cgcatccaggccgagcagcatttcacccagccaccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccgtcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgtggaaatggaaggccgcagcttccgcccgtccgacgtc
ggccgcgcggtgtccaagttcctgtccagccacttcacccagtacgtggactacgacttc
accgccaagctcgaagacgagctcgacgccgtctcgcgtggcgaagaagagtggatcccg
ctgatggcccgcttctgggagccgttcaaggagctggtggaagacaagaaggaatcggtg
gaccgcgccgaggccagtggcgcgcgcgagctcggcaccgacccgaagaccggcaagccg
gtcagcgtgcgcctcggccgcttcgggccttacgccgccatcggcagcaccgccgaggac
gccgaggagaagccgaaattcgcctcgctgcgccccggccagtcgatgcacaccatatcc
ttggaagacgcgctggaactgttcctgatgccacgcgcgctgggcgaggacaacggcgag
ccggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcacctatgcc
tcgctgaagaaggaagacgacccgtacaccatcgacctggcccgcgccgtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccggatcatcaaggagttcgagggcagcgacatc
caggtgctgaacggccgcttcggcccgtacatcagcgacggcaggatgaacggcaagatc
cccaaggatcgcgagccggcatcgctgaccctggccgaagtgcagcagctgatggaagaa
accggcaagcccgtgcgcaagggcttcggcgccaagaaggctgccgcgaagaaggcaccg
gccaagaaggcggcggtgaagaaggaagcggcgccgaagaaggccgcagccaagaaagcg
cctgccaagaaggcggcgaagaaggccgtggtaaagaaggccgctgcaaagaaggcaccg
gcgaagaaggccgtcaagaaagccgcgaagtag
DBGET
integrated database retrieval system
