Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage): SPN23F08950
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Entry
SPN23F08950 CDS
T00843
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sne
Streptococcus pneumoniae ATCC 700669 (serotype 23F ST81 lineage)
Pathway
sne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPN23F08950 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sne03400
]
SPN23F08950 (fpg)
Enzymes [BR:
sne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPN23F08950 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPN23F08950 (fpg)
DNA repair and recombination proteins [BR:
sne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPN23F08950 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
OrfB_Zn_ribbon
Zn-ribbon_8
RNHCP
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAR68721
LinkDB
All DBs
Position
868525..869349
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AA seq
274 aa
AA seq
DB search
MPELPEVETVCRGLEKLIIGKKISSIEIRYPKMIKTDLEEFQRELPSQIIESMGRRGKYL
LFYLTDKVLISHLRMEGKYFYYPDQGPERKHAHVFFHFEDGGTLVYEDVRKFGTMELLVP
DLLDAYFISKKLGPEPSEQDFDLQVFQSALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLW
RAQVHPARSSQTLTAEEATAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGSMQDFHQVY
DKTGQECVRCGTIIEKIQLGGRGTHFCPNCQRRD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccgtttgtcgtggcttagaaaaattgattatagga
aagaagatttcgagtatagaaattcgctaccccaagatgattaagacggatttggaagag
tttcaaagggaattgcctagtcagattatcgagtcaatgggacgtcgtggaaaatatttg
cttttttatctgacagacaaggtcttgatttcccatttgcggatggagggcaagtatttt
tactatccagaccaaggacctgaacgcaagcatgcccatgttttctttcattttgaagat
ggtggcacgcttgtttatgaggatgttcgcaagtttggaaccatggaactcttggtgcct
gaccttttagacgcctactttatttctaaaaaattaggtcctgaaccaagcgaacaagac
tttgatttacaggtctttcaatctgcccttgccaagtccaaaaagcctatcaaatcccat
ctcctagaccagaccttggtagctggacttggcaatatttatgtggatgaggttctctgg
cgagctcaggttcatccagctagatcttcccagactttgacagcagaagaagcgacagct
attcatgaccaaaccattgctgttttgggccaggctgttgaaaaaggcggttccaccatt
cggacttataccaatgcctttggggaagatggaagcatgcaggactttcatcaggtctat
gataagactggtcaagagtgtgtacgctgtggtaccatcattgagaaaattcaactaggc
ggacgaggcacccacttttgtccaaactgtcaaaggagggactga
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