Streptomyces nigrescens: HEK616_45030
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Entry
HEK616_45030 CDS
T08756
Symbol
gabD1
Name
(GenBank) NADP-dependent succinic semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
snig
Streptomyces nigrescens
Pathway
snig00250
Alanine, aspartate and glutamate metabolism
snig00310
Lysine degradation
snig00350
Tyrosine metabolism
snig00650
Butanoate metabolism
snig00760
Nicotinate and nicotinamide metabolism
snig01100
Metabolic pathways
snig01120
Microbial metabolism in diverse environments
Module
snig_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
snig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HEK616_45030 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HEK616_45030 (gabD1)
00310 Lysine degradation
HEK616_45030 (gabD1)
00350 Tyrosine metabolism
HEK616_45030 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HEK616_45030 (gabD1)
Enzymes [BR:
snig01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HEK616_45030 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HEK616_45030 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HEK616_45030 (gabD1)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BDM71016
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Position
complement(4906054..4907451)
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AA seq
465 aa
AA seq
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MAIATVNPATGETLKTFDALNAGEIEDRLVRAEQAFQIHRTTSFARRTELLLKAADLLEA
DQDGIARTMTTEMGKPLVQARAEAAKCVKTMRWYARNAEGLLADEHPDPADVGDSGAMRA
VVRYRPLGPVLAVMPWNFPLWQVVRFAAPALMAGNTGLLKHASNVPQTALYLEELFRRAG
YPEGCFETLLVGSGAVEEILRDPRVAAATLTGSEPAGRSVASIAGDEVKKTVLELGGSDP
FVVLPSADLDKAAKVAVTARVQNNGQSCIAAKRFIVHNDVYDAFSERFTERMAALTVGDP
MDENTDVGPLSSEQGRSDLEELVDDAVHQGATALCGGRRPPEHRAGWFYEPTVLAGITPT
MRIHHEEAFGPVATLYRVADLDEAIELANDTPFGLSSNAWTRDPDEQARLARDIQAGGLY
FNGMTASHPGLPFGGAKRSGYGRELSGHGIKEFCNMTTLWYGPEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgccacggtcaacccggccaccggagagaccctgaagaccttcgacgcgctc
aacgcgggcgagatcgaggaccgcctggtcagggcggagcaggcgttccagatccaccgc
accaccagcttcgcccgccgtacggaactgctgctcaaggccgccgacctgctggaggcc
gatcaggacggcatcgcccgcacgatgaccaccgagatgggaaagccgctggtccaggcc
cgtgccgaggccgcgaagtgcgtcaagaccatgcgctggtacgcccgcaacgccgagggg
ctgctggccgacgagcaccccgacccggcggacgtcggcgactccggggcgatgcgcgcc
gtggtccgctaccggcccctcggcccggtcctcgcggtgatgccgtggaacttcccgctc
tggcaggtcgtacggttcgccgccccggcgctgatggccggcaacaccgggctgctcaag
cacgcctcgaacgtgccgcagaccgccctctacctcgaggagctgttccgccgggccggc
tatcccgagggctgtttcgagaccctgctggtcggctccggcgccgtcgaggagatcctg
cgtgacccgcgggtggccgccgcgacgctgaccggcagtgagccggccgggcgttcggtg
gcgtccatcgccggtgacgaggtcaagaagaccgtgctggagctcggcggcagcgacccg
ttcgtggtgctgccctccgccgacctcgacaaggcggccaaggtcgcggtgaccgcccgg
gtgcagaacaacgggcagtcctgcatcgcggccaagcggttcatcgtgcacaacgacgtc
tacgacgccttcagcgagcggttcaccgagcggatggcggcgctgaccgtcggcgacccg
atggacgagaacaccgacgtcggaccgctctccagcgagcagggccgctccgacctggag
gaactcgtcgatgacgcggtccaccagggtgcgaccgcgctgtgcggcgggcggcggccg
cccgagcaccgggccggctggttctacgagcccacggtgctggcgggcatcaccccgacc
atgcgcatccaccacgaggaggcgttcggcccggtcgccacgctctaccgggtcgccgac
ctcgacgaggcgatcgagctcgccaacgacaccccgttcgggctgagttccaacgcctgg
acccgcgaccccgacgaacaggcccggctggcccgggacatccaggccggcggtctctac
ttcaacggcatgaccgcctcccaccccggcctcccgttcggcggcgccaagcggtccggc
tacgggcgggaactgtccggccacggcatcaaggagttctgcaacatgacgacgctctgg
tacggccccgaggagtga
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