Sulfuriferula nivalis: SFSGTM_23910
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Entry
SFSGTM_23910 CDS
T06628
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
sniv
Sulfuriferula nivalis
Brite
KEGG Orthology (KO) [BR:
sniv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sniv03021
]
SFSGTM_23910 (rpoS)
Transcription machinery [BR:
sniv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFSGTM_23910 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_IclR
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BBP01683
UniProt:
A0A809SA19
LinkDB
All DBs
Position
complement(2510279..2511208)
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AA seq
309 aa
AA seq
DB search
MDDADELPDVLLEAVSEDAFLAQISGVDTLFDERQADVVCMYMQDIGHAELLNATDELAL
ARRVREGDFAARQKMITSNLRLVVSIAKRYQHRGMQLLDLIEEGNLGLIHALEKFEPERG
FRFSTYASWWVRQHIERAIMNQSRAVRLPVHIVKAINVILRARHHLAMHGMQDASVADIA
LLVHMPESEVYELLRLNDSAVSLDSPLNGDTDLSMGDAMADDAAQLPEDVLAKTEVLSFI
QTWLSLLTDKQRGVIERRFGLNNQEVATLEQIADSMNLSRERVRQIQAEALLVLRKQLRR
TGMDAVGLL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcggacgaattgccggatgtgttgctggaggctgtgtctgaggacgccttt
ttagcacagatatccggagtcgatacattattcgatgaacgtcaggccgatgtcgtgtgt
atgtacatgcaagatataggtcatgcggagcttctgaatgccaccgatgaattggcgctg
gcgcgacgtgtgcgggaaggtgattttgcggcaaggcaaaaaatgattaccagcaacttg
cgtttggtcgtcagtattgccaagcgctatcagcatcgaggtatgcaattactagatctg
atagaagagggtaatttaggtttaatccacgccttggagaaatttgagccagaacgcggt
ttccgcttttctacttatgccagttggtgggtgcgacagcatatagagcgagcgatcatg
aaccagtcgcgtgccgtgcgtttacctgtgcatattgttaaagccattaatgttattttg
cgtgctcgtcaccatttggctatgcatggtatgcaagatgccagcgtcgcagatatcgcg
ctattggtgcatatgccagagagcgaagtttatgagttgttacggttgaacgatagtgcc
gtatctttggatagccccttgaatggtgatactgatcttagcatgggtgatgcgatggcg
gatgacgcggcgcagttaccagaagatgtattggcaaagacggaagtattgagttttatt
cagacctggttgagtctgttgacagataagcagcgtggtgtgatagagcggcggtttggt
ctgaataatcaggaggttgctactctggagcaaattgcagacagtatgaatctgagtcgt
gagcgtgtacgccagattcaggccgaggctttattagtgctgcgtaagcagttgcggcgt
accggcatggatgcagtggggttgttgtga
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