KEGG   Sphingomonas sp. NIC1: A7E77_12040Help
Entry
A7E77_12040       CDS       T04479                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
snj  Sphingomonas sp. NIC1
Pathway
snj00970  Aminoacyl-tRNA biosynthesis
snj01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:snj00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    A7E77_12040 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:snj03029]
    A7E77_12040 (gatB)
Enzymes [BR:snj01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     A7E77_12040 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     A7E77_12040 (gatB)
Mitochondrial biogenesis [BR:snj03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    A7E77_12040 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey TPIP1
Motif
Other DBs
NCBI-ProteinID: ANC87565
LinkDB All DBs
Position
2547662..2549128
Genome map
AA seq 488 aa AA seqDB search
MSDYRIQGATGEWEVVIGLEVHAQVTSNAKLFSGAATAFGAEPNTQVSLVDAAMPGMLPV
PNMECIRQAVRTGMAIDAQINTWSRFDRKNYFYADLPQGYQISQLYHPLVGEGAVEIAPD
DKNPDATKTIGVERIHVEQDAGKLMHDQHPTRSYVDLNRSGVALMEIVSRPDMRSPAEAG
AYLTKLRSILRYVGSCDGNMDQGSMRADVNVSVRKPGDEFGTRTETKNVNSVRFVMQAIE
HEALRQVEVLESGGTIVQETRLFNPDTGTTRSMRSKEDAHDYRYFPDPDLLPLELDEAFL
ADCRASLPELPDAKRARYEAAGISPYQAGVLTAEVEAARWFDALLDAGAKPVAAANWTTS
ELFGALNRVGKGIAESPVSPTQAAELLALVADGTLSGSLAKQVFEVMLETGEAPAKIVED
RGLKQTSDTGAIEAVIAEVLAKNPGQLEQYRGGKEALFGFFVGQTMKAMGGKANPGVVNE
LLKKALAG
NT seq 1467 nt NT seq  +upstreamnt  +downstreamnt
atgagcgactatcgcatccagggcgccaccggcgaatgggaggtcgtgatcggcctggaa
gtccacgcccaggtcacgtccaacgccaaattgttctcgggcgccgcgaccgccttcggc
gcggagccgaacacgcaggtcagcctggtcgacgcggcgatgccgggcatgctaccggtg
ccgaacatggagtgcatccgccaggctgtgcgcaccggcatggcgatcgacgcgcagatc
aatacgtggtcgcggttcgaccggaaaaactatttctacgccgatctgccgcagggctat
cagatcagccagctctaccatcctctggtcggcgagggcgcggtcgagatcgcgccggac
gacaagaacccggacgcgaccaagacgatcggcgtcgagcgcatccacgtcgaacaggac
gcgggcaagctgatgcacgaccagcatccgacgcggtcgtatgtcgacctcaaccgttcg
ggcgtcgcgctgatggagatcgtcagccggccggatatgcgatcgcccgccgaagcgggg
gcgtatctcaccaagctgcgctcgatcctgcgctatgtcggcagctgcgacggcaacatg
gatcaagggtcgatgcgcgccgacgtcaacgtctcggtgcgcaagccgggcgacgaattc
ggcacgcgcaccgagacgaagaacgtcaattcggtgcgcttcgtgatgcaggcgatcgag
catgaggcgctgcggcaggtggaggtgctggagagcggcggcacgatcgtgcaggaaacg
cgcctgttcaatccggacaccggcacgacgcggtcgatgcggtcgaaggaagatgcgcac
gattaccgctacttccccgaccccgacctgctgccgctggagctggacgaggcgttcctg
gcggactgccgtgcaagcctgccagagctgcccgacgccaagcgtgcgcgctacgaagcc
gccggcatctcgccctatcaggcgggcgtgctgaccgctgaggtggaggcggcgcgctgg
ttcgacgcgctgctcgacgcgggcgcgaagccggtcgcggcggcgaactggacgacgtcg
gagctgttcggcgcgcttaaccgcgtcggcaagggcatcgccgaatcgccggtgtcgccg
acgcaggcggccgaactgctggcgctggtcgcggacggcaccttgtcgggcagcctggcg
aagcaggtgttcgaggtgatgctggaaacgggcgaggcgccggccaagatcgtcgaggac
cgcgggctcaagcagaccagcgacaccggcgcgatcgaggcggtgatcgccgaggtgctg
gcgaagaaccccggccagctggaacagtatcgcggcggcaaggaggcgctgttcggcttc
tttgtgggccagacgatgaaggcgatgggcggcaaggccaatccgggcgtcgtcaacgaa
ctgctcaaaaaggcactcgccggctga

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