Staphylococcus nepalensis: BJD96_04195
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Entry
BJD96_04195 CDS
T05272
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
snl
Staphylococcus nepalensis
Pathway
snl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJD96_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snl03021
]
BJD96_04195
03019 Messenger RNA biogenesis [BR:
snl03019
]
BJD96_04195
Transcription machinery [BR:
snl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BJD96_04195
Messenger RNA biogenesis [BR:
snl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJD96_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
ATPase_2
AAA
Mor
Spore_III_AA
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ATH59591
UniProt:
A0A291JI82
LinkDB
All DBs
Position
935033..936349
Genome browser
AA seq
438 aa
AA seq
DB search
MPDKVRTSPQYESFHELYKNYTTKDLTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEEVKKRPHFQALTPLYPEERIKLETTKTNYSTRIMDLITPIGLGQ
RGLIVAPPKAGKTSLLKEIANAVATNKPDAELFVLLVGERPEEVTDIERSVESAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGKDVIILMDSITRLARAYNLVMPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSMTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLISPKDLESLWQLRNMFTDSIDFTERFVRKLKRTKTNQEFF
EQLQEAAKESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgataaagtacggacatcacctcagtacgaatcgttccacgagctatacaaaaat
tacactactaaagatcttactcaaaaggcaaaatcacttaaattaacaaattatagtaaa
ttaaataaaaaagaattagttcttgctattatggaagcccaaatggaaaaagacggaaac
tattatatggagggtatcttagacgatattcaacaagatggttatggttttttaagaact
gtcaattattcaaagggtgaaaaagatatttatatatcagctagtcaaatacgtcgcttt
gaaattaaacgtggcgataaagttactggtaaagtcagaaaacctaaggataatgagaaa
tattatggtttactgcaagttgattttgtcaatgatgagaatgcagaggaagttaaaaaa
agaccacatttccaagcgttaacaccattatatccagaagagcgtatcaagttagaaaca
acaaaaacaaattattctacgcgtataatggatttgattacgcctattggtttgggacaa
cgtggtttgattgttgcacctccaaaagcggggaaaacgtcattactaaaagaaattgct
aatgctgtagcaacaaataaacctgatgcagaactgtttgtattacttgtaggtgaacga
ccagaagaggtaacagatatagaacgttctgttgaatcagcagaagttgtgcattcaaca
tttgatgaaccgccacaacatcatgttaaagtagcggaattattattagagcgtgcaaaa
cgtttagtagaaattggtaaagacgtcattattttgatggattctattactagacttgca
cgtgcatataatttagttatgccaccaagcgggcgtacgttatccggtggtttggatcca
gcttcattgcataaaccgaaagctttttttggtgctgcaagaaatattgaagctggcgga
agtatgactatattagccacagcattagtagatactggttcgcgtatggatgacatgata
tatgaagaatttaaagggacaggtaacatggaattacaccttgaccgtaaattagctgaa
cgtcgtgtctttccagctattgatatcggtagaagttcaactcgtaaggaagagttgcta
atttcaccaaaagatctagaatcgctttggcagctacgtaatatgtttactgattcaatt
gattttactgaaagatttgtaagaaagctaaaacgaacaaaaacaaatcaagaatttttc
gaacagttacaagaagcggctaaagaaagtactaaaactggtaaaccaattatttaa
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