Sphaerotilus sulfidivorans: EWH46_16675
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Entry
EWH46_16675 CDS
T06182
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
snn
Sphaerotilus sulfidivorans
Pathway
snn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
snn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EWH46_16675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
snn02022
]
EWH46_16675
02035 Bacterial motility proteins [BR:
snn02035
]
EWH46_16675
Two-component system [BR:
snn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EWH46_16675
Bacterial motility proteins [BR:
snn02035
]
Pilus system
Twitching motility proteins
EWH46_16675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AA_kinase
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QEN02228
UniProt:
A0A5C1Q4B2
LinkDB
All DBs
Position
complement(3662047..3663552)
Genome browser
AA seq
501 aa
AA seq
DB search
MTPPPVAAAPRLLVVDDEPDLRTLYELALLREGYDIETAACVEEAWALLQAARFDAVITD
MRLPDGNGLELLRRLEQAGRPEKTLVITAYGSAENAVLALKAGAFDYLTKPVDLRQFRSV
VASALGRVPTPPRAAVTAVAAAVPAPPVAALQRLSGGSAVMGQVRELVTKVARGMAPVLV
HGESGTGKELVARAVHQVSHRAAQPFVAVNCGAIPEPLLEAEFFGYRKGAFTGASEDREG
FFQAASGGTLFLDEIGELPLAMQSKLLRAIQERAVRPVGATAEQVLDVRIISATHRDLEA
EVRAGRFRQDLYYRLNVIQVRVPPLRERLDDLPLLCETVLARIAAESGLAAVPRLTPAAL
ARLARHDFPGNVRELENLLHRVVALSGGGRVDVDDLGLPGGGVPAPPAVPPVAAPAAGTG
PAGPVGPVGPTGEPPLPADLMAHLDEVEREVLVRALALHRGNRTAAAAAIGLTLRQMRYR
MSRLGVQAAGDGSDEGEEGSA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactccgcccccagttgctgccgcgccgcgcctgctggtcgtcgacgacgagcccgat
ctgcgcaccctctacgagctggcgctgctgcgcgagggctatgacatcgagacggcggcc
tgcgtcgaggaggcctgggcgctgctgcaggctgcccgcttcgatgcggtcatcaccgac
atgcggctgcccgacggcaacgggctggagctgctgcgccggctcgagcaggccggccgg
cccgagaagacgctggtcatcaccgcctacggctcggccgagaacgcggtgctggcgctg
aaggccggtgccttcgactatctgaccaagccggtcgacctgcgccagttccgcagcgtc
gtggcctccgcgctggggcgggtgccgacgccgccgcgtgccgccgtgacggcggtggcc
gccgccgtgccggcaccgccggtcgcggcgctgcagcgcctgtcgggcggctcggcggtg
atgggccaggtgcgcgagctggtgaccaaggtcgcgcgcggcatggcgccggtgctggtg
catggcgagtccggcaccggcaaggagctggtggcccgcgcggtccatcaggtcagccac
cgtgccgcccagcccttcgtcgcggtcaactgcggcgcgattcccgagcctctgctcgag
gcggagttcttcggctaccgcaagggcgccttcaccggcgccagcgaggaccgcgaaggc
ttcttccaggccgccagcggcggcacgctctttctcgacgagatcggcgagctgccgctg
gcgatgcagagcaagctgctgcgcgcgatccaggagcgcgcggtacgtccggtcggtgcc
accgccgagcaggtgctcgatgtgcgcatcatcagcgcgacgcatcgcgatctcgaggcc
gaggtgcgtgccgggcgctttcgccaggatctgtactaccggctcaatgtcattcaggtg
cgggtgccgccgctgcgcgagcggctcgacgatctgccgctgctgtgcgagacggtgctg
gcgcgcatcgccgccgagtccggcctggcggccgtgccccggctgacgccggcggccctg
gcccggctggcccggcacgactttcccggcaatgtgcgcgagctcgagaacctgctgcac
cgggtggtggcgctgtcgggcggcggccgggtcgatgtcgacgatctggggctgccgggc
gggggcgtgccggcgccgccggccgtgccgccggtggccgcgccggccgcgggcacgggt
ccggccggtccggtcggtccggtcggtccgacgggcgagccaccgctgcccgcggacctg
atggcccacctcgacgaggtcgagcgcgaggtgctggtgcgcgcgctggcgctgcaccgc
ggcaatcgcaccgccgccgccgccgccatcggcctgacgctgcgccagatgcgctaccgc
atgagccggctgggcgtgcaggccgccggcgacggcagcgacgagggcgaggagggcagc
gcatga
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