Streptomyces noursei ATCC 11455: SNOUR_12705
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Entry
SNOUR_12705 CDS
T04806
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snr
Streptomyces noursei ATCC 11455
Pathway
snr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOUR_12705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snr03019
]
SNOUR_12705
03400 DNA repair and recombination proteins [BR:
snr03400
]
SNOUR_12705
Enzymes [BR:
snr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SNOUR_12705
Messenger RNA biogenesis [BR:
snr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SNOUR_12705
DNA repair and recombination proteins [BR:
snr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SNOUR_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANZ15852
LinkDB
All DBs
Position
complement(2907554..2909713)
Genome browser
AA seq
719 aa
AA seq
DB search
MDEPELRTEADAILAELVGDPGGSARLREDQWQAVAALVAERRRALVVQRTGWGKSAVYF
VATALLRRRGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSANPEEWESIYGEVERGE
TDVLLVSPERLNSVDFRDQVLPKLAATTGLLVVDEAHCISDWGHDFRPDYRRLRAMLAEL
APGVPVLATTATANARVTADVADQLGTGGGRALVLRGPLERESLRLGVVRLPDAAHRLAW
LAEHLDELPGSGIVYALTVAAAEEATAYLRQRGFPVSSYTGRTENADRLQAEADLLENRV
KALVATSALGMGFDKPDLGFVLHLGSPSSPIAYYQQVGRAGRGVAHADVLLLPGKEDEAI
WRYFADTAFPPEAQVRQTLAVLAEAGRPLSVPALEAAVDLRRSRLETMLKVLDVDGAVKR
VKGGWTATGAAWVYDAERYAWVARQRAAEQQAMRDYVGTTGCRMEFLRRQLDDEGAAPCG
RCDNCAGPWADSAVSAETLTAAVKELDRPGVEIEPRRMWPTGMPALGIDLKGRIPAGEQC
ATGRALGRLSDIGWGNRLRPLLAEQAPDGPVPDDVLRAAVAVLADWARSPGGWASQAPDA
AGRPAGVVAVPSSTRPQLVGSLAQGIATVGRLPFLGSLSYTEAGGGQAPRRSNSAQRLRA
LSGAFAVSEELADALARAQGPVLLVDDCTDSGWTLAVAARLLRRAGSGPVLPLVLAAAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaccggagctccgtaccgaagccgatgccatcctcgccgagctggtcggcgac
ccgggagggtcggcgcgcttgcgggaggaccagtggcaggcggtggcggcgctggtggcg
gagcgccggcgggccctggtggtgcagcgcaccggctggggcaagtcggcggtgtacttc
gtcgccaccgcgctgctgcgccgacgcggctccggccccacggtgatcgtctcgccgctg
ctggcgctgatgcgcaaccaggtggaggcggcggcgcgggccgggatccgggcgcgcacc
atcaactcggccaacccggaggagtgggagtccatctacggggaggtggagcggggcgag
accgacgtcctcctggtcagcccggaacgcctcaactcagtggacttccgtgatcaggtg
ctccccaagctggcggccacgaccggcctgctggtggtggacgaggcgcactgcatctcc
gactggggccacgacttccgccccgactaccgccggctgcgggcgatgctcgccgagctc
gcccccggcgtcccggtgctggccaccaccgcgaccgccaacgcccgggtgaccgcggac
gtggccgaccagctggggaccggcggcggccgggccctggtgctgcgcggcccgctggag
cgggagagcctgcggctgggggtggtccggctgccggacgccgcgcaccgcctggcctgg
ctcgccgagcacctggacgagctgccgggctccggcatcgtctacgcgctgaccgtggcc
gcggccgaggaggccaccgcctacctccggcagcgcgggttcccggtgtcctcctacacg
gggcgcacggagaacgccgaccggctccaggccgaggccgacctgttggagaaccgggtc
aaggcgctggtcgcgacgtcggcgctgggcatgggcttcgacaagccggacctgggcttc
gtgctccacctcggctcgccgtcctcgccgatcgcctactaccagcaggtcgggcgcgcg
gggcgcggcgtggcgcacgccgatgtgctgctgttgccgggcaaggaggacgaggccatc
tggcgctacttcgccgacaccgccttcccgcccgaggcgcaggtccggcagaccctcgcg
gtgctcgcggaggccggtcggccgctgtccgtgccggcgctggaggcggcggtggacctg
cggcgcagccggctggagaccatgctcaaggtgctggacgtcgacggcgcggtcaagcgg
gtcaagggcggctggaccgccaccggggccgcgtgggtgtacgacgccgagcgctatgcc
tgggtggcacggcagcgggccgccgagcagcaggccatgcgcgactacgtgggcacgacc
gggtgccggatggagttcctgcgccggcagttggacgacgagggggcggccccgtgcggc
cgttgcgacaactgcgcggggccctgggccgattccgccgtgtcggcggagacgctgacg
gcggcggtgaaggagctggaccgcccgggggtggagatcgagccgcgccgtatgtggccg
acggggatgcccgcgctgggcatcgacctcaaggggcgcatcccggcgggcgaacagtgc
gccaccgggcgcgccctggggcggctgtcggacatcggctggggcaaccgcctgcgcccg
ctgctggcggagcaggcgcccgacgggccggtgccggacgacgtcctgcgggccgcggtg
gcggtgctggccgactgggcgcgttccccgggcggctgggcgtcgcaggccccggatgcc
gccggccggccggcgggggtcgtcgcggtgccgtcctcgacccgcccgcagttggtgggg
tcgctcgcccaggggatcgcgaccgtcggccggctccccttcctcggctcgctgtcgtac
accgaagccggcggtgggcaggccccgcgccgcagcaactccgcgcagcgcctcagggcg
ctgtccggcgcgttcgccgtctccgaggagctggccgacgccctggcccgcgcgcagggc
cccgtcctgctcgtggacgactgcaccgactccggctggacgctcgccgtcgccgcccgc
ctgctccgccgggcgggcagcgggccggtgctgccgctggtgctcgccgcggcgggctga
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