Streptococcus pneumoniae SPNA45 (serotype 3): SPNA45_01129
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Entry
SPNA45_01129 CDS
T02245
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
snu
Streptococcus pneumoniae SPNA45 (serotype 3)
Brite
KEGG Orthology (KO) [BR:
snu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snu03032
]
SPNA45_01129 (gyrB)
03400 DNA repair and recombination proteins [BR:
snu03400
]
SPNA45_01129 (gyrB)
Enzymes [BR:
snu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SPNA45_01129 (gyrB)
DNA replication proteins [BR:
snu03032
]
Prokaryotic type
DNA Topoisomerases
SPNA45_01129 (gyrB)
DNA repair and recombination proteins [BR:
snu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SPNA45_01129 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CCM08414
LinkDB
All DBs
Position
1123824..1125770
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AA seq
648 aa
AA seq
DB search
MTEEIKNLQAQDYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVWEIVDNSIDEALA
GFASHIQVFIEPDDSITVVDDGRGIPVDIQEKTGRPAVETVFTVLHAGGKFGGGGYKVSG
GLHGVGSSVVNALSTQLDVHVHKNGKIHYQEYRRGHVVADLEIVGDTDKTGTTVHFTPDP
KIFTETTIFDFDKLNKRIQELAFLNRGLQISITDKRQGLEQTKHYHYEGGIASYVEYINE
NKDVIFDTPIYTDGEMDDITVEVAMQYTTGYHENVMSFANNIHTHEGGTHEQGFRTALTR
VINDYARKNKLLKDNEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTKLGNSEVVKITNR
LFSEAFSDFLMENPQIAKRIVEKGILAAKARVAAKRAREVTRKKSGLEISNLPGKLADCS
SNNPAETELFIVEGDSAGGSAKSGRNREFQAILPIRGKILNVEKASMDKILANEEIRSLF
TAMGTGFGAEFDVSKARYQKLVLMTDADVDGAHIRTLLLTLIYRYMKPILEAGYVYIAQP
PIYGVKVGSEIKEYIQPGADQEIKLQEALARYSEGRTKPTIQRYKGLGEMDDHQLWETTM
DPEHRLMARVSVDDAAEADKIFDMLMGDRVEPRREFIEENAVYSTLDV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaatcaaaaatctgcaggcacaggattatgatgccagtcaaattcaagtt
ttagagggcttagaggctgttcgtatgcgtccagggatgtacattggatcaacctcaaaa
gaaggtcttcaccatctagtctgggaaattgttgataactcaattgacgaggccttggca
ggatttgccagccatattcaagtttttattgagccagatgattcgattactgttgtggat
gatgggcgtggtatcccagtcgatattcaggaaaaaacaggccgtcctgctgttgagacc
gtctttacagtccttcacgctggaggaaagttcggcggtggtggatacaaggtttcaggt
ggtcttcacggggtggggtcgtcagttgttaatgccctttcaactcaattagacgttcat
gttcacaaaaatggtaagattcattaccaagaataccgtcgtggtcatgttgtcgcagat
cttgaaatagttggagatacggataaaacaggaacaactgttcacttcacaccggaccca
aaaatcttcactgaaacaacaatctttgattttgataaattaaataaacggattcaagag
ttggcctttctaaatcgcggtcttcaaatttcaattacagataagcgccaaggtttggaa
caaaccaagcattatcattatgaaggtgggattgctagttacgttgaatatatcaacgag
aacaaggatgtaatctttgatacaccaatctatacagacggtgagatggatgatatcaca
gttgaggtagccatgcagtacacaacgggttaccatgaaaatgtcatgagtttcgccaat
aatattcatacacatgaaggtggaacgcatgaacaaggtttccgtacagccttgacacgt
gttatcaacgattatgctcgtaaaaataagttactgaaagacaatgaagacaacctaaca
ggggaagatgttcgcgaaggcttaactgcagttatctcagttaaacacccaaatccacag
tttgaaggacaaaccaagaccaaattgggaaatagcgaagtggtcaagattaccaatcgc
ctcttcagtgaagccttctccgatttcctcatggaaaatccacagattgccaaacgtatc
gtagaaaaaggaattttggctgccaaggctcgtgtggctgccaagcgtgcgcgtgaagtc
acacgtaaaaaatctggtttggaaatttccaaccttccagggaaactagcagactgttct
tctaataaccctgctgaaacagaactcttcatcgtcgaaggagactcagctggtggatca
gccaaatctggtcgtaaccgtgagtttcaggctatccttccaattcgcggtaagattttg
aacgttgaaaaagcaagtatggataagattctagctaacgaagaaattcgtagtcttttc
acagccatgggaacaggatttggcgcagaatttgatgtttcgaaagcccgttaccaaaaa
ctcgttttgatgaccgatgctgatgtcgatggagcccacattcgtacccttcttttaacc
ttgatttatcgttatatgaaaccaatcctagaagctggttatgtttatattgcccaacca
ccaatctatggtgtcaaggttggaagcgagattaaagaatatatccaaccgggtgcagat
caagaaatcaaactccaagaagctttagcccgttatagtgaaggtcgtaccaaaccgact
attcagcgttataaggggctaggtgaaatggacgatcatcagctgtgggaaacaaccatg
gatcccgaacatcgcttgatggctagagtttctgtagatgatgctgcagaagcagataaa
atctttgatatgttgatgggggatcgagtagagcctcgtcgtgagtttatcgaagaaaat
gctgtctatagtacacttgatgtctaa
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