Streptomyces nigra: DC008_08950
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Entry
DC008_08950 CDS
T05839
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
snz
Streptomyces nigra
Pathway
snz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DC008_08950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_08950
Enzymes [BR:
snz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DC008_08950
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DC008_08950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AWE49843
UniProt:
A0A2S1IB63
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All DBs
Position
1930075..1930968
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AA seq
297 aa
AA seq
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MRSQQSGSALPGPSRNPVGGHVPVAGGLSSVGLAYARDLKAETVQVFVANPRGWATPPGN
PRQDEEFRALCAAESIPAYVHAPYLINFGSHTEATVERSVESLRHSLRRGREIGALGVVV
HTGSATGGRDRSVALKQVREHLLPLLDELTHDDDPFLLLESTAGQGSSLCSRTWDFGPYF
EALDAHPKLGVCLDTCHIYAAGHDLTGPSGMHQTLDLLVDTVGEGRLKLIHANDSKDVVG
AHKDRHENIGAGHIGEDPFRALMTHPATAGVPLIIETPGGKEGHAADVERLKKLRDR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgagaagtcagcagtccggttccgccctccccgggccctcccgcaaccccgtcggcggc
catgtcccggtggccggcggcctcagctccgtcggcctcgcctacgcccgcgatctgaag
gccgagacggtccaggtcttcgtcgccaacccgcggggctgggcgaccccgcccggcaat
ccgcgccaggacgaggagttccgggcgctctgcgccgccgagtccataccggcctacgta
cacgcgccgtatctgatcaacttcggctcgcacaccgaggcgaccgtcgagcggtccgtg
gagtcgctgcggcactcgctgcggcgcggccgggagatcggggcgctcggcgtggtggtg
cacacgggcagcgcgaccggcggccgggaccgatcggtggccctgaaacaggtccgcgag
catctgctgccgctgctggacgagctgacccacgacgacgacccgttcctgctgctggag
tccaccgccgggcagggctcctcgctgtgctcgcggacctgggacttcgggccgtacttc
gaggcgctggacgcccatccgaagctgggcgtctgcctggacacctgccacatctacgcg
gccggccacgacctcaccggcccctccgggatgcaccagaccctggacctgctggtggac
acggtcggcgagggccggctgaagctgatccacgccaacgactccaaggacgtcgtcggc
gcccacaaggaccggcacgagaacatcggcgcggggcacatcggcgaggacccgttccgc
gcgctgatgacgcacccggccaccgcgggcgtccccctgatcatcgagaccccgggcggc
aaggagggtcatgccgcggatgtggagcggctgaagaaacttcgcgaccgctga
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