Streptomyces nigra: DC008_12325
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Entry
DC008_12325 CDS
T05839
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snz03019
]
DC008_12325
03009 Ribosome biogenesis [BR:
snz03009
]
DC008_12325
Messenger RNA biogenesis [BR:
snz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DC008_12325
Ribosome biogenesis [BR:
snz03009
]
Eukaryotic type
Pre-60S particles
RNases
DC008_12325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWE50428
UniProt:
A0A2S1ICR1
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All DBs
Position
2673866..2674468
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNILGEGVDIVIRPPDAALETMPEVVR
QMHTASGLLDELPGGTTLADAEERVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKAIAAKHVLPDQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gcgctcatcgaggttgccgccctcgtcaccgactccgagctgaacattctcggcgagggg
gtcgacatcgtcatccgcccgccggacgcggcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccggtctcctcgacgaactccccggcggcacgacgctcgccgac
gccgaggagcgggtcctcgcctatgtccgcgagcatgtgaaggaaccgggcaaggccccg
ctgtgcggcaactccgtcggcaccgaccggggcttcctgctgcgcgacatgccgacgctg
gaggactacctccactaccggatcgtggacgtctcctcgatcaaggagctggcccgccgc
tggtacccgcgcgcctacttcaacagtcccgagaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtcgatcgcagagctgcgctactaccgcgaggccgtcttcgtaccgcag
ccggggcccgactcggacaccgcgaaggcgatcgccgccaagcacgtcctgcctgatcag
tag
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