Streptomyces nigra: DC008_15350
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Entry
DC008_15350 CDS
T05839
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
snz
Streptomyces nigra
Pathway
snz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DC008_15350
09124 Replication and repair
03420 Nucleotide excision repair
DC008_15350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snz03021
]
DC008_15350
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_15350
Enzymes [BR:
snz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DC008_15350
Transcription machinery [BR:
snz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DC008_15350
DNA repair and recombination proteins [BR:
snz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DC008_15350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
ETAA1
IMD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWE50954
UniProt:
A0A2S1IEE5
LinkDB
All DBs
Position
3359470..3361131
Genome browser
AA seq
553 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQADACRRAIAAFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVTYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEVLR
SKRVAPLVGNRIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIDLDEDGWA
LRPYQRQAVENFWHGGSGVVVLPCGAGKTLVGAGAMAEAKSTTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLILYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAEQEEKYRFCATTDTKRKVTEALVRRFAGQQILVIGQYIDQ
LDELGEHLDAPVIKGETSNAQREKLFEAFRQGEINVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTLDQDFAAHRQRFLAEQGYAYRIVDA
DEILAEGAGGTES
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggaccattgatcgtccagtcggacaagaccctgctcctcgaagtggatcacgag
caggccgacgcgtgccgtcgggcgatcgcggcgttcgcggagctggagcgggcgcccgag
cacatccacacctaccgggtgacgccgctcggcctgtggaacgcgcgcgccgccgggcac
gacgccgagcaggtcgtcgacgcgctggtgacgtacagccgctatccggtgccgcacgcg
ctgctggtcgacatcgccgagacgatggaccggtacggccggctcacgctgtccaagcac
cccgcgcacggcctcgtgctgaccaccaccgaccgtccggtcctggaggaggtgctgcgc
tccaagcgtgtcgcgccgctggtcggcaaccgcatcgacccggacacggtcgccgtgcac
ccctccgagcgcgggcagatcaagcagacgctgctcaagctgggctggcccgccgaggac
ctcgccgggtacgtggacggcgaggcgcacccgatcgacctggacgaggacggctgggcg
ctgcggccgtaccagcggcaggccgtggagaacttctggcacggcggcagcggtgtcgtc
gtcctgccctgcggcgccgggaagaccctggtcggtgccggggccatggccgaggccaag
tcgacgacgctgatcctcgtcacgaacaccgtgtccgcccggcagtggaagcacgagctg
gtgaagcggacctcgctgaccgaggaggagatcggcgagtacagcgggacgcgcaaggag
atccgcccggtcaccatcgccacgtaccaggtgctgacgacccggcggaagggcgtctac
ccgcacctggagctgttcgactcccgggactggggcctgatcctctacgacgaggtgcat
ctgctgcccgcgccggtcttcaagttcaccgccgacctccaggcgcggcggcggctcggg
ctgacggcgacgctggtccgcgaggacggccgggagtccgacgtgttctccctgatcggc
cccaagcggttcgacgctccgtggaaggagatcgaggcgcagggctacatcgcgcccgcg
gactgcgtggaggtccgggtgaacctcacggactccgagcggctcgcgtacgccaccgcc
gagcaggaggagaagtaccgcttctgcgcgacgaccgacaccaagcggaaggtcaccgag
gcgctggtgcgccggttcgccgggcagcagatcctggtgatcggccagtacatcgaccag
ctcgacgagctgggcgagcacctggacgcgccggtgatcaagggcgagacgtccaacgcg
cagcgggagaagctgttcgaggcgttccggcagggcgagatcaacgtgctggtggtgtcc
aaggtcgcgaacttctccatcgacctgccggaggcgacggtcgccatccaggtgtcgggg
acgttcggctcgcgtcaggaggaggcgcagcggctcggccgggtgctgcggcccaaggcg
gacgggcaccaggcccacttctactccgtggtcgcgcgggacacgctcgaccaggacttc
gccgcccaccgccagcgcttcctggcggagcagggctacgcgtaccggatcgtggacgcc
gacgagatcctcgcggaaggcgccgggggcaccgagagctga
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