Solenopsis invicta (red fire ant): 105195821
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Entry
105195821 CDS
T03916
Name
(RefSeq) COP1-interactive protein 1
Organism
soc
Solenopsis invicta (red fire ant)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fez1
Crescentin
KASH_CCD
APG6_N
GAS
CC149
CCDC144C
CENP-F_leu_zip
Filament
UPF0242
CALCOCO1
ADIP
EzrA
AAA_13
ERM_helical
COG6_N
HIP1_clath_bdg
SOGA
HMMR_N
DUF724
DUF4472
ZapB
YabA
DUF5082
ATG16
DUF4201
Motif
Other DBs
NCBI-GeneID:
105195821
NCBI-ProteinID:
XP_025992209
LinkDB
All DBs
Position
4:complement(4029638..4037767)
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AA seq
1706 aa
AA seq
DB search
MRDTISHLKLKLVEAEEDTSCAALNRLRAKLRELMKDGQKADQQVSVVVERSMQTSVDLS
KSYEDLLRTERLQAELTQIRRSIEEVVTPVSEERILPLPTDEEEMDMSTLLSQLRNCETL
LAELKTHLDEKTAYAEALRSELDQQKAAAVAAPSLDLDQLIVSPTTTMDEMAEMKEEPGK
PDDKITELLGSLRQSGLARDVQAVSKLQSEIEDMRSQLYNLETEKKELLDELGKIRDVAA
ERDYQINELRNENELLKEHVETTKSERDELNIKNASWDREIRKTHEELGAVKEENNELRS
EIDKLNVDLRLEEEKFQVAQEELRSMRGDLHSLGAENEFLKETLENAKLETNELKEENVA
LKNNLDNMIKELESSRAINNNVKTRLDQLLSENEHLKNELERRMAETDQLKSEGVALKDG
LDRLLQEMDRLKVESDKLKDESAVVKTERDNLTTERDNLKSENGLLKDNLSKTNVALDDA
KKQLNKFKVENEVLTEELEKANVNNNKLLADLNTSQGEMAKLKSENRKLLQEADDGKEQL
TKLSSEIETLKKDVDNTSNKLTRANNEVADLRRGAAELNNELKEAKVINEQLKADIHRTE
TENKDIKAEMSSYKDENDRLNTKLNKLNEQINLSTEEVNKLRGQLDDAEDRVKLLEAQIA
SLQTDKDRMQNEINALQNEIGKLKLDLSSETVAKRDIQEELAALKNEMKNLISKIDEMKV
QSHVLKEERDALKSELLNLGKESSSLRTANAEMMSEINNLRPAISDLQSQLSKAEEDIEY
WKLENCKLKMDVDKLSIETDKTKEALNVCKVEHQALEKEITNLRNEKIKLEGEIAELKNS
LKGLNLSSFAEKSAKEKAVEELTKVKDEAVALREELETLKTELIKLRTENDKIRDKEESL
SRQVSALKAELENTKNEMLALKTDNDALKSKTNTLTAENNKLKNESNKLMSEVDGLKLEN
TDLRKERQKFEEEFGKLKGEGDGQRAEIKSLKSSLTAEQALSEKIRLELSASQSENDRLR
AELENLQKNFDALELANGKLNSEVEDLKKTSIHAQDEVNALQYRLATLLEEKEALLSELD
SLRAEVSGLGKEVVSGKAAKEAAEKKAIVLSGELMELKAELDKTRVENESLKYETNDVNK
RRAVLENENDALKIENTKIAVELDSFKLDLAKVKNDLDKSENQNSELKAEIDELKKVLGN
AETKIKILDEQLVDLSNEKERARNALAQLQDDLNRCRADNERLTIELAASEDRSLAIQRE
LEKTEIENGKLKDDLARVRMERDKERQDLEKLTTENEELRDKLRRAQNEINKLKENIEKS
KGDFIEDVDDIDRSENELKKLMIEIDKAREDLRHATEENNKLKMINEGLELEVGRFKAWQ
DEIKHYPEHVIDTEDQIRQLFVENNVLKMENVELKSSLDDCQAEKARLNNEISNLQNEKV
KLLKSLSPDVEAGVIKPDECGDFVKANELLKKQIEKQYDAVQRVRDYIQYVDGKIPSRPP
MATTLDDDFEINRWTVPSIVELLKESQKLSESIYLAEIEVQDIDELLRLLNKCRMDNENY
IKQLSELGVEVTKVAGADNGDELAAFDPESWLKSLTLTQLAELHDKICLLTSNMVQQDSS
AAVCDRSAINRDHGSDRLRADYDALNRRIAALQKQIAEKQIEAGWKLQELRRALRLEQAN
LIRIADRMNLEKRRNLALHLTMDDST
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacacgatatcgcatctgaagctgaagctggtggaagccgaggaggatacttcc
tgtgcggcattaaatcgtttgagggcaaagcttcgtgagttaatgaaagatggtcagaag
gctgatcaacaggtgtccgtggttgtcgagagatcaatgcagacatcggtggatctatca
aagagctacgaggatctgttacgaacggagcgtctgcaagctgaattgacgcagattcgc
cgttcaatagaggaggttgttacaccggtctcagaggagaggatccttcctctacctaca
gatgaggaagaaatggacatgtcgacactgctaagccagttacgtaattgcgagacgctc
ctggctgaattgaaaacgcatttggatgagaagacggcttacgcggaggctctacgaagc
gaactcgatcaacagaaagccgccgccgtcgccgcaccgtcgttagatctggatcagtta
atcgtcagtcctacgaccacgatggatgaaatggccgaaatgaaggaggaacctggaaaa
cctgacgataagattacggagctactcggaagcctgcggcagtcgggactggcacgggat
gtgcaagccgtgagtaagttgcagagcgagatcgaagatatgaggtcccagctgtataat
cttgagacggagaaaaaggaacttctcgatgagctggggaagatacgagatgtggcggcc
gagagagactatcaaataaatgaactccgcaacgaaaatgagcttctgaaggagcacgtt
gagacaacgaaatccgaacgcgacgaattaaatatcaagaatgcatcgtgggacagggaa
attcgaaaaacacacgaagaattgggggcagttaaagaagaaaataatgaattaaggagc
gagatcgataagttgaacgttgacctgcgtcttgaggaagaaaaatttcaagtggcgcaa
gaagagctacggagcatgaggggcgatttgcatagtctcggggcagagaatgaattcttg
aaagagacattggaaaatgctaaattagagactaacgaacttaaagaagaaaatgttgct
ttgaaaaacaatcttgataacatgattaaggaattggaatcttcgagagcgataaataat
aatgttaagacaaggctggatcaattattatccgagaatgagcatttaaagaacgaatta
gagaggcgaatggcggagactgatcaattaaaatccgaaggggttgcattgaaggatggc
ctcgatagactgctacaagaaatggatagattaaaggttgagagcgataaactgaaggac
gaaagtgctgttgttaaaaccgaaagagacaatctgacgactgaaagggacaacttgaaa
tccgagaatggtcttcttaaagacaacctgtctaagacaaatgtagcgttagacgacgca
aagaaacaattgaacaaatttaaagtcgagaatgaagttcttacagaagaattggagaag
gctaatgtaaataataacaagctactcgcggacttgaatacttcgcagggcgaaatggca
aagttgaagtcggagaacagaaaattgttacaagaagcggatgatgggaaagaacaacta
acaaaattatcgtccgaaatagaaactctgaaaaaggatgtggataatacaagtaataaa
ttgacgagggcaaataacgaagttgcagatttgcggcgaggagcggccgagttaaataat
gaactgaaagaggcgaaagttataaacgaacagctaaaggcagatattcaccgaacggaa
acagagaacaaggacattaaggcggagatgagtagctacaaagacgaaaatgataggcta
aacacgaaactaaataaactgaatgaacaaataaatttatcgacggaagaagtaaacaaa
ttaagaggacaactcgacgacgccgaggatcgggttaagcttctcgaggctcagatcgct
agtttacagactgataaggacaggatgcaaaatgagatcaacgctttgcaaaatgagatc
ggaaaactgaaactagatctaagttcggaaactgttgctaaacgagacattcaggaagaa
ttagcggcgttaaagaacgagatgaaaaatttgatctcgaagatcgacgagatgaaggtg
caaagtcatgttctgaaagaagagagagacgccctcaaaagcgagctgctgaatctgggc
aaggaatcgtcgagcctaaggaccgcgaatgctgagatgatgagcgagattaataattta
agaccggctatatcagatcttcaatcgcaattatctaaggcggaggaagatattgaatat
tggaagttggaaaattgcaagcttaaaatggacgtagataagttatccatcgagactgac
aagacaaaggaagctttaaacgtctgtaaggttgagcatcaggcattagagaaagagata
acgaatcttagaaacgagaagattaagctcgagggagaaatagcggagcttaaaaattcg
ttaaaaggactaaatctgtcttcattcgccgaaaaatctgctaaagaaaaggctgtggag
gaactgacgaaggttaaagacgaggccgttgctttaagagaggagcttgaaacattgaaa
actgaattgattaaattaagaacagagaatgataaaataagagataaagaggagagcttg
tcgcgtcaagtatcagcattaaaggcagaacttgaaaacacaaaaaatgaaatgttagct
ttgaaaacggacaatgacgcattaaaatcgaaaacgaatacgctaacggctgaaaacaac
aaattgaaaaatgaatcgaataagctgatgtccgaggtggatggcctgaaactggagaac
acggatctgaggaaagaacgacagaaattcgaggaagaatttggcaaactgaaaggcgag
ggtgatgggcagagggctgaaattaaaagtctgaagtccagcctgacggctgaacaggca
ttatcagaaaaaattagattggaattatctgctagccaatcggaaaacgatagattgaga
gcggagctggaaaatctgcagaagaatttcgatgctcttgaattggcgaatggcaagttg
aatagcgaagtagaggatttaaagaaaacgtcgatccacgcgcaggacgaggtgaacgca
ttgcaatatcgtttggccacgttgctggaggagaaggaggcacttttgagtgagttagat
agtttacgagcggaagtgagtggattaggtaaagaagttgtgtcgggtaaagctgcgaag
gaagctgccgagaaaaaggcgatcgttctaagcggcgaattaatggagctaaaggcggaa
ctggataagacgcgcgtggaaaatgaaagtttgaaatatgagacgaacgatgtgaataaa
cgacgcgctgtactggaaaacgaaaatgacgctctgaaaatcgaaaatactaaaatagca
gtggaactcgattccttcaagttggatttagcaaaagtgaagaatgacctcgataaatcc
gagaatcagaacagcgagttaaaggcagagatcgacgaattgaagaaagtactcggcaat
gccgaaacaaagattaaaattttagatgaacagcttgttgacttgtcgaatgaaaaagag
agggccagaaatgccctggcccaattgcaagacgatttgaatagatgcagggcggataac
gaacgattaacaatcgaattggccgcctcggaagatcggtcgttagcgatacagagagaa
ttggagaagactgaaatcgaaaatggcaaattaaaagatgatttggcgagagtgaggatg
gagcgtgataaagagcggcaagatttagagaagttaacgacagaaaatgaagaattgcgg
gacaagctaagaagagcgcagaatgagatcaataaattaaaagagaatatcgagaaatcg
aaaggtgattttatagaggatgtggacgatatcgacaggtctgaaaatgaattgaagaaa
ttgatgatcgagatagacaaggcgagagaagatttaaggcacgcgacggaagagaataat
aaattaaaaatgatcaatgaaggtctcgaattagaagtaggtcgattcaaagcgtggcag
gacgaaataaaacattatcctgagcatgttattgatacggaggaccaaattcgacaactg
tttgtcgagaataatgtgctgaaaatggaaaacgtggaactaaaatccagtttggatgac
tgtcaagctgaaaaggcgcgcttaaacaacgaaatcagtaatttgcagaacgaaaaggtt
aaattactgaaatctctctctcctgacgtagaggctggcgtgattaaaccggatgaatgc
ggcgacttcgttaaggcgaatgaattactgaagaagcaaattgaaaagcaatatgacgcc
gtgcaacgtgtgcgtgattatatacaatatgtggatggcaaaattccatcgagaccgccg
atggcgacgacgctagacgatgattttgagatcaatcgctggaccgtgccgtccattgtg
gagttattaaaagaatcgcaaaagctatccgagagtatctatttagcagagatcgaggta
caggatatcgatgaactgttgagactgcttaataaatgcaggatggataatgagaattac
ataaagcaattatcggagcttggtgtggaagttaccaaggttgcaggtgcggataatggc
gatgagcttgcagcttttgaccctgaatcttggttgaaatctttgacactaacacaactg
gctgagctgcacgataagatctgtctgttgacttcaaatatggtgcaacaagatagcagc
gctgcggtctgcgatcgatcagcgattaaccgggaccacggtagcgatcggctgcgggcg
gattacgatgccttaaaccggcggatcgccgccttgcagaagcaaatagctgagaagcag
attgaggcggggtggaagctgcaggaattaagacgagctcttcgtcttgagcaggcaaac
ctgattcgaatcgctgatcggatgaatctcgaaaagagacgcaacttggctctccacctc
actatggacgattcaacgtga
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integrated database retrieval system
