Solenopsis invicta (red fire ant): 105196255
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Entry
105196255 CDS
T03916
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
soc03041
]
105196255
Spliceosome [BR:
soc03041
]
Common components
Common spliceosomal components
General mRNP proteins
105196255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
DUF5521
Motif
Other DBs
NCBI-GeneID:
105196255
NCBI-ProteinID:
XP_039304562
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All DBs
Position
4:complement(6963135..6974171)
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AA seq
1017 aa
AA seq
DB search
MSDSGTDSTSSEGYDEDRNRLTLAGDEVTSSRYSHHSSGSERRKSATSSIFSGEKSLQSP
LSPGGESKSPRSTPLSPKSQRSGIMSPSEEGSPRSIRSLSKSPPLSPSPISPSYRPPASP
TYQPNDSPKSYHSGNNSLDSPRSDRSMSRSPVQDNGSCLSPSNDSKSMRFGDVESKASDL
EADTQRSADNSLKSYSYKNSESRQSSPKSPRSGRSSVKSLISARSSPKSFKSGPASPMDD
QESDKPSSVHSGPRSPEEEKNGSYNELDGEQISDGDIEDEPEPTSKSKPTPMTHGEDLSD
VSDLESMDGPEESTEQNVETDKAQEQDAKQEIINDEENMEKEDKIAPVGLTEESEQLDFE
ADGQWKDERDDGETEAPVVKETKENQEKDSKEKDKDKDKDKTKSKESGEINDKEEGEEGE
KEESELEEGELSDGDDVRPEETEPRPVCRFYSRGQCTWGVSCRFLHPGVTDKGNYTMFDM
VRPMAYPPHAAAPHEYRSHIDRPSMRSSLPGYGAPTHAPKVEETPAESAWERGLRHAKEM
MRKANKRKESDMDFEEKKMNLSLGQDELDREAGYYVRAASPEPPVERWPQREVPRRVSSS
RLTPERYVDEPEGYYPPSASTDYYRRVHYKDSRDYRDRFDYHAIPRGTQSVSPPPHNRDR
ERERDRERERERDYYEKYEKKHKRPSREVIVERIPPTNKPWREEEPPPVERSRGDEWADP
WMRRKSPSTIRRNTSSRRQPRRQSYSSGSSYSSTSSSRSSSRSSYSSYDSLSRSRSPSPP
SRTRSAGKSKPPVITSPPTNPPAVTAATPQRAMLMNPPAPSPRPPKGSISPTTGTLHRRA
GLNPPAPSPLSTHRHHDKAREQKAAIAAAAVAKIIKSRSRSRSSHSSSGSESSGSSSDSS
ESSYSSSSSETHRRKGSTPPIPRKDSKGIDALKLSGAKQQIKLTLKPTSNATAVKKIDRS
ALMAGKKRGIESPPLDSKAQVAAAAAKAAKKASSRREELLKQLKAVEDAIARKRSKV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctggtacagatagcacttcgtcggagggttatgacgaggacaggaatcgg
ctcacattagccggggacgaggtgacgtcgtcacgctactcacaccattcctccggatca
gagcggcgaaagtctgccacgagttctatcttctccggagagaagtctctgcaatcacca
ttgtcaccgggtggtgagtccaagtcaccgcggtccaccccgttatcgcccaagtcgcaa
agatccgggataatgtctcccagcgaggaaggctctccgaggtcgatccgcagtttatca
aaatcaccacccttgtcgccgtcgcccatatcaccgtcatatcgcccgccggcatcgccg
acatatcaaccgaacgactcgccgaagtcctatcattcgggaaacaactccctcgattca
cctcggtcggatcgcagcatgtcgcgatcacctgtacaggacaatggatcgtgtctctct
ccgtcaaacgactccaagtctatgcgcttcggggacgtggaatcgaaggcatctgacctc
gaagcggatacgcaaagatctgccgacaattcgttaaaatcgtactcttacaagaatagc
gagtccaggcaaagttcgccaaagtcgcccagatcgggccggagttccgtcaagtccttg
atatcggcgaggagctcaccaaagtcgttcaaatccggcccggcatctcctatggacgat
caggagtcggataaaccctcatcggtgcattcgggccctcggtcccccgaggaagagaaa
aacgggtcgtataacgaattggacggcgagcaaatctcggatggggacattgaggatgaa
ccagagcccacgtcgaaatctaaacctacacctatgactcatggcgaggatttgtcggat
gtgtcggatcttgaaagcatggacggacctgaggaatctaccgaacaaaacgtcgaaaca
gataaagctcaggaacaagatgccaaacaagaaatcattaatgacgaagagaatatggaa
aaagaagacaaaattgcaccggttggcttgacagaagaaagtgaacaattagactttgaa
gccgatggtcaatggaaagacgaacgtgatgatggtgaaactgaggcgcctgttgtgaag
gaaactaaagaaaaccaagaaaaagacagtaaagagaaagataaagataaagacaaggat
aagacgaagtcgaaagaatccggcgaaataaatgataaagaagaaggagaagaaggagag
aaagaggaatctgaattggaggaaggggagctcagtgacggggatgacgtacggccggag
gagactgagccaagaccggtgtgtcgcttctatagtcgtggtcagtgtacgtggggcgtt
agctgtagatttttacatccaggagtgacggacaaaggtaactacactatgttcgatatg
gtgagacctatggcgtatccgccacacgctgccgcaccacatgaatataggtcacacatc
gatagaccgagtatgcgatcgtcgttacccggttacggtgctcctacacacgcacctaag
gtggaggagacgccggctgaatctgcttgggagcgcggtctgcgtcatgccaaggaaatg
atgcgtaaagccaataaacgcaaagaatcggatatggatttcgaggagaaaaaaatgaac
ttgagtttaggacaagatgagctagatagagaggctggttattacgttcgagcggctagt
ccagagccgccggtcgagagatggccgcaacgagaagtaccgcgcagggtatcgtcatct
agactcacgccagaaagatatgttgacgaacctgagggatattatcctccgtccgcgtca
actgactattatagacgagtacactacaaagattcccgtgattaccgggatcgtttcgat
tatcacgcaattcctcgtggtacacaatcggtttctccaccaccgcataatcgcgatcgc
gagagggagcgagatcgtgagcgcgaaagagagcgcgattactacgagaagtatgagaag
aagcataagcggccgtcgagggaggtcattgtggaacgtattcctccgacaaacaaacct
tggcgagaggaagaaccacctcctgtcgagaggagtagaggtgacgaatgggcagacccg
tggatgcgacgcaaatctccgagcactatacgccgcaacacgtcatcccgtcgacagcct
cggcgacaatcttattcttccggatcttcatattcttcaacgagttctagccgtagctcc
agtcgttctagctacagttcttacgactccctatccaggtctcgttcaccctctcctcca
tctagaacccgttccgctggcaaaagcaagccccctgtcatcacttccccacctacgaat
cctccggctgttactgcagccacgcctcaacgagccatgctaatgaatcctcctgcccct
tctcctcgtccacccaagggctctatctcccctacaacgggtacgctgcatcgacgggct
ggattgaacccacctgccccaagcccgctctcgactcatcgccatcacgacaaagccagg
gaacaaaaggctgctatcgctgcagccgctgtggctaagatcattaaaagtcgttctaga
tctagatcatcccacagtagttcgggatcagagagcagcggaagtagcagtgattcgagc
gaatcaagttactcatcgtcctccagcgagacgcatagaagaaagggttcgacgccgccg
ataccgcgcaaggattccaaaggcatcgatgcattgaagctgagcggcgcgaagcagcag
attaagctgacattgaaacccacgagcaacgccacagcggtaaaaaaaattgaccgtagt
gcacttatggcaggtaaaaagcggggtatcgagtcaccgccgttagacagcaaggcgcaa
gtggccgcagcggcggccaaagccgctaagaaggcaagctcgcgacgcgaggaattgttg
aaacaactaaaggccgttgaagatgctatcgcacgtaaaagatcgaaagtttaa
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