Solenopsis invicta (red fire ant): 105203923
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Entry
105203923 CDS
T03916
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
3.6.4.13
]
Organism
soc
Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
soc03009
]
105203923
Ribosome biogenesis [BR:
soc03009
]
Eukaryotic type
90S particles
Helicases
105203923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ResIII
Flavi_DEAD
ATPase
T2SSE
HA2_N
Helicase_RecD
AAA_30
Herpes_ori_bp
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
105203923
NCBI-ProteinID:
XP_011171158
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All DBs
Position
16:5641534..5647497
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AA seq
1187 aa
AA seq
DB search
MGKKRYNWKSRAVANVEVDNSTTKEIALDIEHRAEDYDNCNALVLPAQKRKTKNIDKKVT
TTRLLSKKRRKQLEKVVERKKKKLQRATLLEELAKVQASPAELQQYTSLTSLQNKGLKRH
FRELEAPVEKLKRKADDEEEDEEGEHDSMKTTVNSIKMSKKKRLAILDNIKQDGAKLDPN
VVGFESSDSSDEEDSDNEEENKAHVPEDIAVSKVVNKKAEINEQNDEKDLIKDVAKKTTS
VESQESQKSVEEPQQNAVPIIRKPAVFIPVNRKPEIQAARLKLPVVAEEQVIVETINENP
IVIITGETGSGKTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEELNLSQKEVS
YLIRFEGNVTEETKIKFMTDGVLLKEIQSDFLLTKYSVIILDEAHERSVYTDILIGLLSR
IVPLRNKRGNPLKLIIMSATLSVKEFVENNRLFKVKPPVIEVKARQFLVKIHFNRKTSTD
YVNEALRKAIKIHTRLPEGGILIFLTGQREVLTVVRKLRKFFPLKKNKPLVKVVKDTEKM
SETSDTEHNEKDDSEDDFDAEEALRRNKQRQKKQIILPTINLDDYSINPTDDTHEDLINA
QDDDDNFDEDEDEDEDVIDFKRLTNAQPLWVLPLYSLLSGHKQARVFEPPPEGCRLCVVS
TNVAETSLTIPNIRYVVDSGRCKTRLYDKVTGVSTYHISYASKAAATQRAGRAGRTRPGH
CYRLYSSAVYDNDFEEYSQSEIQRKPVDDLLLQMKTMNIDKVVNFPFPTPPDIVQLKSAE
KRLMILGALEPPSKKQGEMYCAKVTPLGRSIAAFPVSPHYGKMLALSHQHNLSKYTICMV
AALSVQEVLLETLDTEGTKSKWLETRRSWARTGNSLLLGDPMVLIRAIGTAEYAGSNGKL
LPFCEENGLRYKAVVEIRKLRQQLTNEINLNVPNLNLIIDPKMPLPTDTEAKLLRQIVLA
GMADQVAKKVLPDEIKEDQDKIKWKNAYRTPEMEEPVFIHSTCVLRKTRPEWVVYQELYE
TNKMYMRGVTAIEPEWLPKFAPTLCRLSEPLAEPPPRYNQGTGKIICRVSGTFGKAGWAL
PLMDMEHPSTVDGVKWFAYFFLEGQVCPKLKRFVPSLLTTPGSITKSWAKLIPRTQVIVQ
ALQSQGVMSKDKLVEIWDSDKKFLLLAYQKWLPESAHAEVARLWPPL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgttataactggaaatcgagagcggttgcgaacgtggaagtcgataat
tccactactaaagagattgcactagacatcgagcatcgcgccgaggactatgataattgc
aacgcactcgtcttgcctgcacaaaaaagaaaaacgaaaaacatagataagaaagtgacg
accactcgactgttatcaaagaaacgcagaaaacaattggaaaaagtagtcgaacggaag
aagaaaaagttacagagagcgacattgttagaagaactggcaaaagtgcaagcttctcct
gctgagttgcaacagtacacaagtctaacgtccttgcaaaataaaggcttaaaacgtcat
tttcgagagcttgaggcacctgttgaaaaattaaagcgcaaagcagatgacgaagaggaa
gatgaggaaggtgaacatgattcaatgaagactactgtaaattctattaaaatgagcaag
aaaaaaagattagccattcttgataacataaaacaagacggagctaagcttgatccaaat
gtagttggatttgaatccagtgatagcagtgatgaagaagatagtgacaacgaagaagaa
aataaagcacatgttcctgaggatattgctgtttctaaggtggtaaataaaaaggctgaa
ataaatgaacagaatgatgagaaggacctcataaaagatgtggccaagaaaacaacttca
gttgaatctcaggaatctcagaagtctgtggaagaaccacaacaaaatgctgtacccata
attcgcaagcctgctgtttttatacctgtaaatagaaaacccgagatacaagcggccaga
ttgaaactgcctgttgttgcggaggaacaagttatagttgaaacgataaatgagaatcca
atagttataattactggagaaacgggaagtggaaagactacgcaagtacctcaattttta
tacgaggctggatatgctcaaaataaattgatcggaataaccgaaccaagaagagtagca
gcgatgtcgatgagcaagcgtgtagctgaagaactgaatctctcacaaaaagaagtttcg
tatctgattcgttttgagggaaatgttacagaggaaacaaagatcaaattcatgaccgat
ggtgttttactgaaagagattcaaagtgattttctattgacaaaatattctgtaattata
ctcgacgaagcgcacgaacgcagtgtgtataccgacatcctcatcggtttattgtcaaga
atcgtcccgctgcgtaataaacgtggcaatcctttgaagttaataattatgtcggctacg
ctgtccgtgaaagaatttgtagaaaacaataggctatttaaggtaaaaccgccggtaatt
gaagttaaagcgcgacagtttcttgtaaagatacattttaatagaaaaacaagcacggat
tatgttaatgaagcattacggaaagcaataaaaatacatactcgtcttccggaaggtggc
atattaatatttttaacaggtcagcgagaggtgcttacggttgtgcgtaaattacgcaaa
ttctttccattgaagaagaataaacctctagttaaagtggtgaaagatactgaaaaaatg
tcagaaacatctgatacagaacacaatgaaaaagacgattccgaagacgattttgacgca
gaggaagcgttgcgacgtaataagcagaggcaaaagaaacagattatattgccaactatt
aatctcgatgattattcgataaatcctactgatgacacgcacgaagatttaatcaatgcg
caggacgatgatgacaactttgacgaagatgaagatgaggatgaagatgttatcgatttt
aagagactgacgaatgcacagccattatgggtcttacctctttattcccttttgtctggg
cacaaacaggccagagtgtttgagccaccgccggaaggatgtcgcctatgcgtggtgtcc
accaatgttgcagaaacttctctgacgattcccaatatcagatacgttgtagatagcggg
cgttgtaaaactaggctatatgacaaggtgacgggtgtaagcacgtatcacattagctat
gcgagcaaagcagcggccactcaacgtgccggcagagccggtagaactcgacctggtcat
tgctataggttgtattcatcagctgtatacgataacgacttcgaggaatacagtcagtca
gagattcagaggaaaccagtagacgatttgctactgcagatgaagacgatgaatatagac
aaagtcgtgaactttccgtttcccacgccaccggatatcgtgcaattaaaatccgcggag
aaacgactcatgattcttggagcattagagccgccttcgaaaaaacagggagaaatgtac
tgcgcgaaggtgacgccacttggacgcagtatcgccgcgttcccggtttctccgcattac
ggcaagatgctggcgttgtcgcatcagcataacttgtcgaaatacacgatatgtatggtg
gcagctcttagcgtgcaagaagtattactggagacactcgacacggaaggaactaagagc
aaatggctggaaacgcgtcgttcttgggctaggactggcaacagtttgcttctcggcgac
ccaatggttctgataagagccatcggaactgcggaatacgcaggatcaaatggaaagctg
ttgcccttctgcgaggaaaatggcttgagatacaaagcagtagttgagattaggaaactt
agacaacagctcaccaacgagattaatttgaacgtgccaaatctaaatttaatcattgat
ccaaaaatgccgttgccaacagatacagaagcaaaattgttgcgtcaaatagtccttgcg
ggtatggcggatcaagtcgcgaaaaaagttttgcccgacgagataaaagaagatcaggac
aagatcaagtggaagaacgcgtacagaacaccggaaatggaggagcccgtgtttatacat
tccacatgtgttctacgaaaaactagaccagaatgggtagtttatcaggagttgtatgaa
acgaataagatgtacatgcgaggtgtcacggcgatagaacccgagtggttaccgaaattc
gcgcccacgttgtgccgcctcagcgaaccactggctgagccaccgccaagatataatcaa
ggaactgggaagatcatctgtcgcgtatccgggacgttcggaaaagctggatgggcacta
ccgctaatggatatggagcacccgtcgacagtggacggtgtcaaatggtttgcgtatttt
tttttggagggtcaggtgtgccctaagctgaaacgctttgtcccgtcgctgctgacaaca
cctggtagcatcaccaagtcatgggcaaagctgataccacgcactcaagtaatagtacaa
gcgttacagtcgcagggagtcatgtccaaagataaacttgtagaaatctgggattcggac
aaaaaatttctactgcttgcgtatcagaagtggctaccggaatctgcgcatgcagaagta
gcacggttatggccacctttgtaa
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integrated database retrieval system
